Synthelite: Chemist-aligned and feasibility-aware synthesis planning with LLMs
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Abstract (arXiv)
Computer-aided synthesis planning (CASP) has long been envisioned as a complementary tool for synthetic chemists. However, existing frameworks often lack mechanisms to allow interaction with human experts, limiting their ability to integrate chemists' insights. In this work, we introduce Synthelite, a synthesis planning framework that uses large language models (LLMs) to directly propose retrosynthetic transformations. Synthelite can generate end-to-end synthesis routes by harnessing the intrinsic chemical knowledge and reasoning capabilities of LLMs, while allowing expert intervention through natural language prompts. Our experiments demonstrate that Synthelite can flexibly adapt its planning trajectory to diverse user-specified constraints, achieving up to 95% success rates in both strategy-constrained and starting-material-constrained synthesis tasks. Additionally, Synthelite exhibits the ability to account for chemical feasibility during route design. We envision Synthelite to be both a useful tool and a step toward a paradigm where LLMs are the central orchestrators of synthesis planning.
Key facts. Cited by 10 papers in the map (data through 14 Oct 2026). Builds on 27 of its 57 references that are in the map. First posted on arXiv 18 Dec 2025.
Builds on
27 of 57 references.
References · 27
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15 more
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- 2021Permutation invariant graph-to-sequence model for template-free retrosynthesis and reaction predictioncited by 68
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- 2024Double-Ended Synthesis Planning with Goal-Constrained Bidirectional Searchcited by 24
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Built on by
Citing papers per year: 2025: 1; 2026: 9.
10 papers.
- 2026When Single Answer Is Not Enough: Rethinking Single-Step Retrosynthesis Benchmarks for LLMscited by 5
- 2025MiST: Understanding the Role of Mid-Stage Scientific Training in Developing Chemical Reasoning Modelscited by 3
- 2026URSA: Chemistry-Aware Benchmark for Utilitarian Retrosynthesis Assessmentcited by 2
- 2026Mimosa Framework: Toward Evolving Multi-Agent Systems for Scientific Researchcited by 1
- 2026MMORF: A Multi-agent Framework for Designing Multi-objective Retrosynthesis Planning Systemscited by 1
- 2026Project Ariadne: Prompt-Conditioned Route Generation for Synthesis Planningcited by 1
- 2026Agentic generation of verifiable rules for deterministic, self-expanding reaction classificationcited by 1
- 2026Strategy-first synthesis planning for complex natural productscited by 0
- 2026An Agentic Retrobiosynthesis Framework with Learned Frontier Selectioncited by 0
- 2026Coverage Before Control: Route-Instruction Grounding and Steering for Controllable Retrosynthesiscited by 0
- 2026Coverage Before Control: Route-Instruction Grounding and Steering for Controllable Retrosynthesis30 Sep 2026
- 2026An Agentic Retrobiosynthesis Framework with Learned Frontier Selection31 Aug 2026
- 2026Strategy-first synthesis planning for complex natural products7 Aug 2026
- 2026URSA: Chemistry-Aware Benchmark for Utilitarian Retrosynthesis Assessment6 Jul 2026
- 2026Agentic generation of verifiable rules for deterministic, self-expanding reaction classification1 Jul 2026
- 2026Project Ariadne: Prompt-Conditioned Route Generation for Synthesis Planning23 Jun 2026
- 2026MMORF: A Multi-agent Framework for Designing Multi-objective Retrosynthesis Planning Systems6 Apr 2026
- 2026Mimosa Framework: Toward Evolving Multi-Agent Systems for Scientific Research30 Mar 2026
- 2026When Single Answer Is Not Enough: Rethinking Single-Step Retrosynthesis Benchmarks for LLMs3 Feb 2026
- 2025MiST: Understanding the Role of Mid-Stage Scientific Training in Developing Chemical Reasoning Models24 Dec 2025
Similar, not cited
Close in wording, no citation either way
- 2025Chemical reasoning in LLMs unlocks strategy-aware synthesis planning and reaction mechanism elucidation
- 2026Representation Alignment as a Bottleneck in LLM-Based Retrosynthesis Planning
- 2026RetroPlanner: Multi-Route Expansion and Multi-Objective Reasoning for LLM-Based Retrosynthesis Planning
- 2026RetroAgent: Harnessing LLMs to Search Over Structured Memory for Agentic Retrosynthesis Planning
- 2025SynCraft: Guiding Large Language Models to Predict Edit Sequences for Molecular Synthesizability Optimization
- 2026Reinforced Reasoning for End-to-End Retrosynthetic Planning
- 2025RetroDFM-R: Reasoning-Driven Retrosynthesis Prediction with Large Language Models via Reinforcement Learning
- 2025Retro-Expert: Collaborative Reasoning for Interpretable Retrosynthesis