False Discovery Rate Control via Bayesian Mirror Statistic
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Abstract (arXiv)
Simultaneously performing variable selection and inference in high-dimensional models is an open challenge in statistics and machine learning. The increasing availability of vast amounts of variables requires the adoption of specific statistical procedures to accurately select the most important predictors in a high-dimensional space, while being able to control some form of selection error. In this work we adapt the Mirror Statistic approach to False Discovery Rate (FDR) control into a Bayesian modelling framework. The Mirror Statistic, developed in the classic frequentist statistical framework, is a flexible method to control FDR, which only requires mild model assumptions, but requires two sets of independent regression coefficient estimates, usually obtained after splitting the original dataset. Here we propose to rely on a Bayesian formulation of the model and use the posterior distributions of the coefficients of interest to build the Mirror Statistic and effectively control the FDR without the need to split the data. Moreover, the method is very flexible since it can be used with continuous and discrete outcomes and more complex predictors, such as with mixed models. We keep the approach scalable to high-dimensions by relying on Automatic Differentiation Variational Inference and fully continuous prior choices.
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References · 8
- 2016Variational Inference: A Review for Statisticianscited by 1,466
- 2016Automatic Differentiation Variational Inferencecited by 159
- 2016Panning for Gold: Model-X Knockoffs for High-dimensional Controlled Variable Selectioncited by 120
- 2014Controlling the false discovery rate via knockoffscited by 97
- 2017Sparsity information and regularization in the horseshoe and other shrinkage priorscited by 43
- 2020False Discovery Rate Control via Data Splittingcited by 12
- 2019Controlling False Discovery Rate Using Gaussian Mirrorscited by 10
- 2020A Scale-free Approach for False Discovery Rate Control in Generalized Linear Modelscited by 8
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