MolVision: Molecular Property Prediction with Vision Language Models
On the map: Multimodal LLMs / vision-language models → Chart understanding and anomaly detection
Abstract (arXiv)
Molecular property prediction is a fundamental task in computational chemistry with critical applications in drug discovery and materials science. While recent works have explored Large Language Models (LLMs) for this task, they primarily rely on textual molecular representations such as SMILES/SELFIES, which can be ambiguous and structurally less informative. In this work, we introduce MolVision, a novel approach that leverages Vision-Language Models (VLMs) by integrating both molecular structure as images and textual descriptions to enhance property prediction. We construct a benchmark spanning ten diverse datasets, covering classification, regression and description tasks. Evaluating nine different VLMs in zero-shot, few-shot, and fine-tuned settings, we find that visual information improves prediction performance, particularly when combined with efficient fine-tuning strategies such as LoRA. Our results reveal that while visual information alone is insufficient, multimodal fusion significantly enhances generalization across molecular properties. Adaptation of vision encoder for molecular images in conjunction with LoRA further improves the performance. The code and data is available at : hrefhttps://molvision.github.io/MolVision/https://molvision.github.io/MolVision/.
Key facts. Cited by 5 papers in the map (data through 14 Oct 2026). Placed in Chart understanding and anomaly detection, one of 16 directions in Multimodal LLMs / vision-language models. Builds on 36 of its 58 references that are in the map. First posted on arXiv 4 Jul 2025.
Builds on
36 of 58 references.
References · 36
- 2021Learning Transferable Visual Models From Natural Language Supervisioncited by 33,744
- 2020Language Models are Few-Shot Learnerscited by 32,419
- 2023GPT-4 Technical Reportcited by 18,396
- 2014Microsoft COCO: Common Objects in Contextcited by 17,608
- 2021LoRA: Low-Rank Adaptation of Large Language Modelscited by 14,380
- 2023Llama 2: Open Foundation and Fine-Tuned Chat Modelscited by 13,028
- 2020A Simple Framework for Contrastive Learning of Visual Representationscited by 12,049
- 2023Judging LLM-as-a-Judge with MT-Bench and Chatbot Arenacited by 8,626
- 2023Visual Instruction Tuningcited by 7,869
- 2023BLIP-2: Bootstrapping Language-Image Pre-training with Frozen Image Encoders and Large Language Modelscited by 6,137
- 2023Improved Baselines with Visual Instruction Tuningcited by 4,418
- 2022Flamingo: a Visual Language Model for Few-Shot Learningcited by 4,386
24 more
- 2017Neural Message Passing for Quantum Chemistrycited by 3,487
- 2015VQA: Visual Question Answeringcited by 2,506
- 2023Qwen-VL: A Versatile Vision-Language Model for Understanding, Localization, Text Reading, and Beyondcited by 2,224
- 2021Conceptual 12M: Pushing Web-Scale Image-Text Pre-Training To Recognize Long-Tail Visual Conceptscited by 1,216
- 2017MoleculeNet: A Benchmark for Molecular Machine Learningcited by 1,051
- 2023mPLUG-Owl: Modularization Empowers Large Language Models with Multimodalitycited by 1,040
- 2025Janus-Pro: Unified Multimodal Understanding and Generation with Data and Model Scalingcited by 812
- 2022Galactica: A Large Language Model for Sciencecited by 744
- 2023CogVLM: Visual Expert for Pretrained Language Modelscited by 708
- 2022EVA: Exploring the Limits of Masked Visual Representation Learning at Scalecited by 691
- 2023LLaMA-Adapter V2: Parameter-Efficient Visual Instruction Modelcited by 602
- 2021OGB-LSC: A Large-Scale Challenge for Machine Learning on Graphscited by 329
- 2023What can Large Language Models do in chemistry? A comprehensive benchmark on eight taskscited by 185
- 2022Translation between Molecules and Natural Languagecited by 177
- 2023MolCA: Molecular Graph-Language Modeling with Cross-Modal Projector and Uni-Modal Adaptercited by 128
- 2024ChemLLM: A Chemical Large Language Modelcited by 106
- 2022SELFIES and the future of molecular string representationscited by 76
- 2017Deep Learning for Computational Chemistrycited by 38
- 2023nach0: Multimodal Natural and Chemical Languages Foundation Modelcited by 26
- 2020Exploring Chemical Space using Natural Language Processing Methodologies for Drug Discoverycited by 24
- 2023Highly Accurate Quantum Chemical Property Prediction with Uni-Mol+cited by 22
- 2023Artificial Intelligence for Drug Discovery: Are We There Yet?cited by 11
- 2022Molecular Fingerprints for Robust and Efficient ML-Driven Molecular Generationcited by 2
- 2023Coarse-Grained Configurational Polymer Fingerprints for Property Prediction using Machine Learningcited by 1
Built on by
Citing papers per year: 2026: 5.
5 papers.
- 2026Towards Agentic Intelligence for Materials Sciencecited by 3
- 2026Toward Better Geometric Representations for Molecule Generative Modelscited by 1
- 2026MolSight: Molecular Property Prediction with Imagescited by 1
- 2026MolDeTox: Evaluating Language Model's Stepwise Fragment Editing for Molecular Detoxificationcited by 0
- 2026When Vision Meets Graphs: A Survey on Graph Reasoning and Learningcited by 0
- 2026When Vision Meets Graphs: A Survey on Graph Reasoning and Learning3 Sep 2026
- 2026MolDeTox: Evaluating Language Model's Stepwise Fragment Editing for Molecular Detoxification12 May 2026
- 2026MolSight: Molecular Property Prediction with Images11 May 2026
- 2026Toward Better Geometric Representations for Molecule Generative Models8 May 2026
- 2026Towards Agentic Intelligence for Materials Science29 Jan 2026
Similar, not cited
Close in wording, no citation either way
- 2026MolSight: A Graph-Aware Vision-Language Model for Unified Chemical Image Understanding
- 2023Beyond Chemical Language: A Multimodal Approach to Enhance Molecular Property Prediction
- 2026MolEmb: Multimodal Large Language Models Can Be Strong Molecular Embedding Models
- 2025TinyChemVL: Advancing Chemical Vision-Language Models via Efficient Visual Token Reduction and Complex Reaction Tasks
- 2025Mol-LLM: Multimodal Generalist Molecular LLM with Improved Graph Utilization
- 2026MolE-RAG: Molecular Structure-Enhanced Retrieval-Augmented Generation for Chemistry
- 2026DeepMoLM: Leveraging Visual and Geometric Structural Information for Molecule-Text Modeling
- 2026MolLangData: A Large-Scale Dataset for Molecular Structure-Language Description via a Rule-Regularized Method