mlsanityData to 7 Oct 2026

SciReplicate-Bench: Benchmarking LLMs in Agent-driven Algorithmic Reproduction from Research Papers

arXiv 2504.00255 ↗First posted 31 Mar 2025cs.CL cs.AI cs.MAcited by 42

On the map: LLM agents and tool use → Web, search, and research agents

Abstract (arXiv)

This study evaluates large language models (LLMs) in generating code from algorithm descriptions in recent NLP papers. The task requires two key competencies: (1) algorithm comprehension: synthesizing information from papers and academic literature to understand implementation logic, and (2) coding expertise: identifying dependencies and correctly implementing necessary APIs. To facilitate rigorous evaluation, we introduce SciReplicate-Bench, a benchmark of 100 tasks from 36 NLP papers published in 2024, featuring detailed annotations and comprehensive test cases. Building on SciReplicate-Bench, we propose Sci-Reproducer, a dual-agent framework consisting of a Paper Agent that interprets algorithmic concepts from literature and a Code Agent that retrieves dependencies from repositories and implements solutions. To assess algorithm understanding, we introduce reasoning graph accuracy, which quantifies similarity between generated and reference reasoning graphs derived from code comments and structure. For evaluating implementation quality, we employ execution accuracy, CodeBLEU, and repository dependency/API recall metrics. In our experiments, we evaluate various powerful non-reasoning and reasoning LLMs as foundational models. The best-performing LLM using ModelName~achieves only 39% execution accuracy, highlighting the benchmark's difficulty. Our analysis identifies missing or inconsistent algorithm descriptions as key barriers to successful reproduction. We make available our benchmark and code at https://github.com/xyzCS/SciReplicate-Bench and project homepage at https://xyzcs.github.io/scireplicate.github.io/.

Key facts. Cited by 42 papers in the map (data through 7 Oct 2026). Placed in Web, search, and research agents, one of 16 directions in LLM agents and tool use. Builds on 71 of its 93 references that are in the map. First posted on arXiv 31 Mar 2025.

Builds on

71 of 93 references.

Closest ancestors · 8

Same direction, newest first

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  2. 2025MLGym: A New Framework and Benchmark for Advancing AI Research Agents20 Feb
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  5. 2024CORE-Bench: Fostering the Credibility of Published Research Through a Computational Reproducibility Agent Benchmark17 Sep
  6. 2024SciAgents: Automating scientific discovery through multi-agent intelligent graph reasoning9 Sep
  7. 2024Can LLMs Generate Novel Research Ideas? A Large-Scale Human Study with 100+ NLP Researchers6 Sep
  8. 2023MLAgentBench: Evaluating Language Agents on Machine Learning Experimentation5 Oct

Other references · 63

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  11. 2025Stop Overthinking: A Survey on Efficient Reasoning for Large Language Modelscited by 456
  12. 2024CodeAgent: Enhancing Code Generation with Tool-Integrated Agent Systems for Real-World Repo-level Coding Challengescited by 278
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  7. 2022Evaluating the Text-to-SQL Capabilities of Large Language Modelscited by 101
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  9. 2023GLiNER: Generalist Model for Named Entity Recognition using Bidirectional Transformercited by 84
  10. 2024RouterDC: Query-Based Router by Dual Contrastive Learning for Assembling Large Language Modelscited by 84
  11. 2024DevEval: A Manually-Annotated Code Generation Benchmark Aligned with Real-World Code Repositoriescited by 71
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  13. 2021Can We Automate Scientific Reviewing?cited by 63
  14. 2023ML-Bench: Evaluating Large Language Models and Agents for Machine Learning Tasks on Repository-Level Codecited by 63
  15. 2024LLMs Assist NLP Researchers: Critique Paper (Meta-)Reviewingcited by 62
  16. 2025ResearchBench: Benchmarking LLMs in Scientific Discovery via Inspiration-Based Task Decompositioncited by 57
  17. 2024When is Tree Search Useful for LLM Planning? It Depends on the Discriminatorcited by 46
  18. 2024Lifelong Knowledge Editing for LLMs with Retrieval-Augmented Continuous Prompt Learningcited by 40
  19. 2023ToolCoder: Teach Code Generation Models to use API search toolscited by 37
  20. 2023Neuron-Level Knowledge Attribution in Large Language Modelscited by 37
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  29. 2024Generating Interesting Scientific Ideas using Knowledge Graphs and LLMs: Evaluations with 100 Research Group Leaderscited by 21
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  32. 2024Bridging Local Details and Global Context in Text-Attributed Graphscited by 15
  33. 2023KwaiAgents: Generalized Information-seeking Agent System with Large Language Modelscited by 14
  34. 2024Addressing Order Sensitivity of In-Context Demonstration Examples in Causal Language Modelscited by 12
  35. 2024Beyond Single-Event Extraction: Towards Efficient Document-Level Multi-Event Argument Extractioncited by 12
  36. 2024MaskLID: Code-Switching Language Identification through Iterative Maskingcited by 10
  37. 2024Advancing Adversarial Suffix Transfer Learning on Aligned Large Language Modelscited by 10
  38. 2024Enhancing Knowledge Distillation of Large Language Models through Efficient Multi-Modal Distribution Alignmentcited by 10

50 most cited of 63 All 63 (JSON)

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2025: 13; 2026: 29.

42 papers.

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  1. 2025From LLM Reasoning to Autonomous AI Agents: A Comprehensive Reviewcited by 146
  2. 2025From Automation to Autonomy: A Survey on Large Language Models in Scientific Discoverycited by 86
  3. 2025From AI for Science to Agentic Science: A Survey on Autonomous Scientific Discoverycited by 74
  4. 2025Paper2Code: Automating Code Generation from Scientific Papers in Machine Learningcited by 67
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  6. 2025RECODE-H: A Benchmark for Research Code Development with Interactive Human Feedbackcited by 24
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  10. 2026AutoSOTA: An End-to-End Automated Research System for State-of-the-Art AI Model Discoverycited by 17
  11. 2025How Far Are AI Scientists from Changing the World?cited by 15
  12. 2026FIRE-Bench: Evaluating AI Agents on the Rediscovery of Scientific Insightscited by 13
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  4. 2026SciCoQA: Quality Assurance for Scientific Paper--Code Alignmentcited by 9
  5. 2026ReplicatorBench: Benchmarking LLM Agents for Replicability in Social and Behavioral Sciencescited by 9
  6. 2026Can Coding Agents Reproduce Findings in Computational Materials Science?cited by 9
  7. 2026AutoResearch AI: Towards AI-Powered Research Automation for Scientific Discoverycited by 9
  8. 2026MLReplicate: Benchmarking Autonomous Research Systems for Machine Learning Reproducibilitycited by 6
  9. 2026Can LLMs Write Reliable Rubrics? A Meta-Evaluation for Experiment Reproductioncited by 6
  10. 2026Autonomous Research Agents: A Survey of AI Scientists and the Verification Gapcited by 6
  11. 2026HiRAS: A Hierarchical Multi-Agent Framework for Paper-to-Code Generation and Executioncited by 5
  12. 2026Training AI Scientists to Replicate Researchcited by 4
  13. 2026MDGYM: Benchmarking AI Agents on Molecular Simulationscited by 3
  14. 2026Agentic Discovery of Neural Architectures: AIRA-Compose and AIRA-Designcited by 3
  15. 2026Jailbreak Foundry: From Papers to Runnable Attacks for Reproducible Benchmarkingcited by 2
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  17. 2026Overview of the NLPCC 2026 Shared Task 11: Agent-Based Experiment Reproduction from Scientific Paperscited by 2
  18. 2026APRES: An Agentic Paper Revision and Evaluation Systemcited by 1
  19. 2026REVERE: Reflective Evolving Research Engineercited by 1
  20. 2026From paper to benchmark: agentic, framework-based reproduction of under-specified methods in machine health intelligencecited by 1
  21. 2026Coding-agents can replicate scientific machine learning paperscited by 1
  22. 2026SA-Bench: Evaluating Semantic Alignment in LLM-Based Paper Reproductioncited by 1
  23. 2026ReproAgent: Contract-Guided Paper-to-Code Reproductioncited by 1
  24. 2025Automated Reproducibility Has a Problem Statement Problemcited by 0
  25. 2026ArtifactLinker: Linking Scientific Artifacts for Automatic State-of-the-Art Discoverycited by 0
  26. 2026Which Algorithm Specification Formats Help Language Models Implement Machine Learning Algorithms?cited by 0
  27. 2026MADE: Belief-Driven Dual-Agent Coordination for Autonomous Model Deploymentcited by 0
  28. 2026QuantumMind: Constraint-Grounded Agentic Reasoning for Speedup Analysis in Quantum Computingcited by 0
  29. 2026PaperDoctor: Evidence-Grounded and Actionable Feedback for Scientific Papers in Progresscited by 0
  30. 2026RECLAIM: Can Agents Reproduce the Claims of Machine Learning Papers?cited by 0

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