mlsanityData to 7 Oct 2026

Brain Foundation Models: A Survey on Advancements in Neural Signal Processing and Brain Discovery

arXiv 2503.00580 ↗First posted 1 Mar 2025cs.LG cs.AI eess.SPcited by 22

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Abstract (arXiv)

Brain foundation models (BFMs) have emerged as a transformative paradigm in computational neuroscience, offering a revolutionary framework for processing diverse neural signals across different brain-related tasks. These models leverage large-scale pre-training techniques, allowing them to generalize effectively across multiple scenarios, tasks, and modalities, thus overcoming the traditional limitations faced by conventional artificial intelligence (AI) approaches in understanding complex brain data. By tapping into the power of pretrained models, BFMs provide a means to process neural data in a more unified manner, enabling advanced analysis and discovery in the field of neuroscience. In this survey, we define BFMs for the first time, providing a clear and concise framework for constructing and utilizing these models in various applications. We also examine the key principles and methodologies for developing these models, shedding light on how they transform the landscape of neural signal processing. This survey presents a comprehensive review of the latest advancements in BFMs, covering the most recent methodological innovations, novel views of application areas, and challenges in the field. Notably, we highlight the future directions and key challenges that need to be addressed to fully realize the potential of BFMs. These challenges include improving the quality of brain data, optimizing model architecture for better generalization, increasing training efficiency, and enhancing the interpretability and robustness of BFMs in real-world applications.

Key facts. Cited by 22 papers in the map (data through 7 Oct 2026). Builds on 23 of its 40 references that are in the map. First posted on arXiv 1 Mar 2025.

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23 of 40 references.

References · 23

  1. 2018BERT: Pre-training of Deep Bidirectional Transformers for Language Understandingcited by 40,204
  2. 2021Learning Transferable Visual Models From Natural Language Supervisioncited by 33,456
  3. 2023Segment Anythingcited by 8,158
  4. 2021On the Opportunities and Risks of Foundation Modelscited by 3,961
  5. 2024Large Brain Model for Learning Generic Representations with Tremendous EEG Data in BCIcited by 311
  6. 2022Self-Supervised Contrastive Pre-Training For Time Series via Time-Frequency Consistencycited by 246
  7. 2024CBraMod: A Criss-Cross Brain Foundation Model for EEG Decodingcited by 188
  8. 2024NeuroLM: A Universal Multi-task Foundation Model for Bridging the Gap between Language and EEG Signalscited by 83
  9. 2023BrainBERT: Self-supervised representation learning for intracranial recordingscited by 70
  10. 2023Neuro-GPT: Towards A Foundation Model for EEGcited by 69
  11. 2024Brain-JEPA: Brain Dynamics Foundation Model with Gradient Positioning and Spatiotemporal Maskingcited by 64
  12. 2024EEGFormer: Towards Transferable and Interpretable Large-Scale EEG Foundation Modelcited by 51
11 more
  1. 2024BrainSegFounder: Towards 3D Foundation Models for Neuroimage Segmentationcited by 36
  2. 2023MBrain: A Multi-channel Self-Supervised Learning Framework for Brain Signalscited by 26
  3. 2024BrainWave: A Brain Signal Foundation Model for Clinical Applicationscited by 26
  4. 2024FoME: A Foundation Model for EEG using Adaptive Temporal-Lateral Attention Scalingcited by 16
  5. 2025CEReBrO: Compact Encoder for Representations of Brain Oscillations Using Efficient Alternating Attentioncited by 13
  6. 2024Anatomical Foundation Models for Brain MRIscited by 11
  7. 2024Toward Generalizing Visual Brain Decoding to Unseen Subjectscited by 7
  8. 2024BrainMAE: A Region-aware Self-supervised Learning Framework for Brain Signalscited by 6
  9. 2023Meta Transfer of Self-Supervised Knowledge: Foundation Model in Action for Post-Traumatic Epilepsy Predictioncited by 5
  10. 2024Towards a Foundation Model for Brain Age Prediction using coVariance Neural Networkscited by 4
  11. 2023Digital twin brain: a bridge between biological intelligence and artificial intelligencecited by 1

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Citing papers per year: 2025: 10; 2026: 12.

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  1. 2025EEG Foundation Models: A Critical Review of Current Progress and Future Directionscited by 30
  2. 2025CodeBrain: Bridging Decoupled Tokenizer and Multi-Scale Architecture for EEG Foundation Modelcited by 23
  3. 2026NeuralBench: A Unifying Framework to Benchmark NeuroAI Modelscited by 13
  4. 2025EEG Foundation Challenge: From Cross-Task to Cross-Subject EEG Decodingcited by 12
  5. 2026DeeperBrain: A Neuro-Grounded EEG Foundation Model Towards Universal BCIcited by 7
  6. 2025ECHO: Toward Contextual Seq2Seq Paradigms in Large EEG Modelscited by 6
  7. 2025Embracing Trustworthy Brain-Agent Collaboration as Paradigm Extension for Intelligent Assistive Technologiescited by 5
  8. 2026OmniEEG-Bench: A Standardized Evaluation Benchmark for EEG Foundation Modelscited by 5
  9. 2025Transformer-based EEG Decoding: A Surveycited by 3
  10. 2025Multi-dataset Joint Pre-training of Emotional EEG Enables Generalizable Affective Computingcited by 2
  11. 2026SCOPE: Structured Prototype-Guided Adaptation for EEG Foundation Models with Limited Labelscited by 1
  12. 2026FPED: A Functional-Network Prior-Guided Mixture-of-Experts Framework for Interpretable Brain Decodingcited by 1
10 more
  1. 2026The Variance Brain Foundation Models Forgot: Third-Order Statistics Predict Cognition Where Billion-Parameter Models Failcited by 1
  2. 2025Brain foundation model-guided source-selective domain adaptation for cross-subject EEG decodingcited by 0
  3. 2025Introducing Multimodal Paradigm for Learning Sleep Staging PSG via General-Purpose Modelcited by 0
  4. 2025EEG-DLite: Dataset Distillation for Efficient Large EEG Model Trainingcited by 0
  5. 2026Interpretable Cross-Network Attention for Resting-State fMRI Representation Learningcited by 0
  6. 2026CAMEL-CLIP: Channel-aware Multimodal Electroencephalography-text Alignment for Generalizable Brain Foundation Modelscited by 0
  7. 2026DLink: Distilling Layer-wise and Dominant Knowledge from EEG Foundation Modelscited by 0
  8. 2026Foundation models for discovering robust biomarkers of neurological disorders from dynamic functional connectivitycited by 0
  9. 2026Machine Learning Methods for Studying Latent Neural Activity Dynamicscited by 0
  10. 2026Flattening the Connectome Spectrum: A Spectral Filter for FC Induces a Pretraining Target for fMRI Encoderscited by 0