Benchmarking Domain Generalization Algorithms in Computational Pathology
Not on the map. Why?
Abstract (arXiv)
Deep learning models have shown immense promise in computational pathology (CPath) tasks, but their performance often suffers when applied to unseen data due to domain shifts. Addressing this requires domain generalization (DG) algorithms. However, a systematic evaluation of DG algorithms in the CPath context is lacking. This study aims to benchmark the effectiveness of 30 DG algorithms on 3 CPath tasks of varying difficulty through 7,560 cross-validation runs. We evaluate these algorithms using a unified and robust platform, incorporating modality-specific techniques and recent advances like pretrained foundation models. Our extensive cross-validation experiments provide insights into the relative performance of various DG strategies. We observe that self-supervised learning and stain augmentation consistently outperform other methods, highlighting the potential of pretrained models and data augmentation. Furthermore, we introduce a new pan-cancer tumor detection dataset (HISTOPANTUM) as a benchmark for future research. This study offers valuable guidance to researchers in selecting appropriate DG approaches for CPath tasks.
Key facts. Cited by 3 papers in the map (data through 7 Oct 2026). Builds on 45 of its 79 references that are in the map. First posted on arXiv 25 Sep 2024.
Builds on
45 of 79 references.
References · 45
- 2015Deep Residual Learning for Image Recognitioncited by 51,809
- 2017Model-Agnostic Meta-Learning for Fast Adaptation of Deep Networkscited by 4,861
- 2015Domain-Adversarial Training of Neural Networkscited by 3,023
- 2019Invariant Risk Minimizationcited by 1,832
- 2021Barlow Twins: Self-Supervised Learning via Redundancy Reductioncited by 1,818
- 2020WILDS: A Benchmark of in-the-Wild Distribution Shiftscited by 1,366
- 2019Distributionally Robust Neural Networks for Group Shifts: On the Importance of Regularization for Worst-Case Generalizationcited by 1,232
- 2016Deep CORAL: Correlation Alignment for Deep Domain Adaptationcited by 1,194
- 2017A Survey on Deep Learning in Medical Image Analysiscited by 1,182
- 2020In Search of Lost Domain Generalizationcited by 1,042
- 2017Learning to Generalize: Meta-Learning for Domain Generalizationcited by 762
- 2021Generalizing to Unseen Domains: A Survey on Domain Generalizationcited by 762
33 more
- 2020Out-of-Distribution Generalization via Risk Extrapolation (REx)cited by 737
- 2020Self-Challenging Improves Cross-Domain Generalizationcited by 426
- 2021Domain Adaptation for Medical Image Analysis: A Surveycited by 351
- 2020Gradient Starvation: A Learning Proclivity in Neural Networkscited by 262
- 2021Invariance Principle Meets Information Bottleneck for Out-of-Distribution Generalizationcited by 220
- 2021SelfReg: Self-supervised Contrastive Regularization for Domain Generalizationcited by 189
- 2020Improve Unsupervised Domain Adaptation with Mixup Trainingcited by 185
- 2020Adaptive Risk Minimization: Learning to Adapt to Domain Shiftcited by 183
- 2017Domain Generalization by Marginal Transfer Learningcited by 180
- 2019Quantifying the effects of data augmentation and stain color normalization in convolutional neural networks for computational pathologycited by 172
- 2022Benchmarking Self-Supervised Learning on Diverse Pathology Datasetscited by 148
- 2020Learning explanations that are hard to varycited by 132
- 2020Self-Path: Self-supervision for Classification of Pathology Images with Limited Annotationscited by 89
- 2022Probable Domain Generalization via Quantile Risk Minimizationcited by 66
- 2024A Clinical Benchmark of Public Self-Supervised Pathology Foundation Modelscited by 64
- 2020When is invariance useful in an Out-of-Distribution Generalization problem ?cited by 52
- 2021SAND-mask: An Enhanced Gradient Masking Strategy for the Discovery of Invariances in Domain Generalizationcited by 50
- 2020NuClick: A Deep Learning Framework for Interactive Segmentation of Microscopy Imagescited by 46
- 2022One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classificationcited by 38
- 2021Quantifying and Improving Transferability in Domain Generalizationcited by 35
- 2023CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Countingcited by 33
- 2022Invariant Causal Mechanisms through Distribution Matchingcited by 31
- 2023Domain Generalization in Computational Pathology: Survey and Guidelinescited by 29
- 2023Domain generalization across tumor types, laboratories, and species -- insights from the 2022 edition of the Mitosis Domain Generalization Challengecited by 25
- 2023Domain Generalization via Balancing Training Difficulty and Model Capabilitycited by 19
- 2021Learning Representations that Support Robust Transfer of Predictorscited by 17
- 2021Stain-Robust Mitotic Figure Detection for the Mitosis Domain Generalization Challengecited by 14
- 2022On the Limitations of General Purpose Domain Generalisation Methodscited by 10
- 2022IMPaSh: A Novel Domain-shift Resistant Representation for Colorectal Cancer Tissue Classificationcited by 10
- 2021Robust Interactive Semantic Segmentation of Pathology Images with Minimal User Inputcited by 8
- 2021Simultaneous Nuclear Instance and Layer Segmentation in Oral Epithelial Dysplasiacited by 8
- 2022Mitosis Detection, Fast and Slow: Robust and Efficient Detection of Mitotic Figurescited by 6
- 2023Nuclear Segmentation and Classification: On Color & Compression Generalizationcited by 4
Built on by
Citing papers per year: 2025: 1; 2026: 2.
3 papers.
- 2025Distilling foundation models for robust and efficient models in digital pathologycited by 33
- 2026The Mean is the Mirage: Entropy-Adaptive Model Merging under Heterogeneous Domain Shifts in Medical Imagingcited by 0
- 2026Entropy Minimization without Model Collapse: Mitigating Prediction Bias in Medical Imagingcited by 0
- 2026Entropy Minimization without Model Collapse: Mitigating Prediction Bias in Medical Imaging1 Jun 2026
- 2026The Mean is the Mirage: Entropy-Adaptive Model Merging under Heterogeneous Domain Shifts in Medical Imaging24 Feb 2026
- 2025Distilling foundation models for robust and efficient models in digital pathology27 Jan 2025