Probabilistic Medical Predictions of Large Language Models
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Abstract (arXiv)
Large Language Models (LLMs) have shown promise in clinical applications through prompt engineering, allowing flexible clinical predictions. However, they struggle to produce reliable prediction probabilities, which are crucial for transparency and decision-making. While explicit prompts can lead LLMs to generate probability estimates, their numerical reasoning limitations raise concerns about reliability. We compared explicit probabilities from text generation to implicit probabilities derived from the likelihood of predicting the correct label token. Across six advanced open-source LLMs and five medical datasets, explicit probabilities consistently underperformed implicit probabilities in discrimination, precision, and recall. This discrepancy is more pronounced with smaller LLMs and imbalanced datasets, highlighting the need for cautious interpretation, improved probability estimation methods, and further research for clinical use of LLMs.
Key facts. Cited by 16 papers in the map (data through 7 Oct 2026). Builds on 26 of its 50 references that are in the map. First posted on arXiv 21 Aug 2024.
Builds on
26 of 50 references.
References · 26
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Citing papers per year: 2025: 9; 2026: 7.
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- 2026Towards Reliable Medical LLMs: Benchmarking and Enhancing Confidence Estimation of Large Language Models in Medical Consultation22 Jan 2026
- 2025MedKGent: A Large Language Model Agent Framework for Constructing Temporally Evolving Medical Knowledge Graph17 Aug 2025
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- 2025HySemRAG: A Hybrid Semantic Retrieval-Augmented Generation Framework for Automated Literature Synthesis and Methodological Gap Analysis1 Aug 2025
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- 2025Multi-modal Integration Analysis of Alzheimer's Disease Using Large Language Models and Knowledge Graphs21 May 2025
- 2025AOR: Anatomical Ontology-Guided Reasoning for Medical Large Multimodal Model in Chest X-Ray Interpretation5 May 2025
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- 2025LLMs in Disease Diagnosis: A Comparative Study of DeepSeek-R1 and O3 Mini Across Chronic Health Conditions13 Mar 2025
- 2025BRIDGE: Benchmarking Large Language Models for Understanding Real-world Clinical Practice Textcited by 11
- 2025AOR: Anatomical Ontology-Guided Reasoning for Medical Large Multimodal Model in Chest X-Ray Interpretationcited by 8
- 2025MoMA: A Mixture-of-Multimodal-Agents Architecture for Enhancing Clinical Prediction Modellingcited by 7
- 2025LLMs in Disease Diagnosis: A Comparative Study of DeepSeek-R1 and O3 Mini Across Chronic Health Conditionscited by 3
- 2025Rehabilitation Exercise Quality Assessment and Feedback Generation Using Large Language Models with Prompt Engineeringcited by 3
- 2025Scalable Medication Extraction and Discontinuation Identification from Electronic Health Records Using Large Language Modelscited by 1
- 2025Multi-modal Integration Analysis of Alzheimer's Disease Using Large Language Models and Knowledge Graphscited by 0
- 2026Towards Reliable Medical LLMs: Benchmarking and Enhancing Confidence Estimation of Large Language Models in Medical Consultationcited by 0
- 2026EpiScreen: Early Epilepsy Detection from Electronic Health Records with Large Language Modelscited by 0
- 2026CLSGen: A Dual-Head Fine-Tuning Framework for Joint Probabilistic Classification and Verbalized Explanationcited by 0
- 2026Language-Induced Priors for Domain Adaptationcited by 0
- 2026Evidence-Grounded AI for Musculoskeletal Carecited by 0
- 2026Evidence-Grounded AI for Musculoskeletal Care14 Jul 2026
- 2026Language-Induced Priors for Domain Adaptation14 May 2026
- 2026CLSGen: A Dual-Head Fine-Tuning Framework for Joint Probabilistic Classification and Verbalized Explanation13 Apr 2026
- 2026EpiScreen: Early Epilepsy Detection from Electronic Health Records with Large Language Models30 Mar 2026
- 2026Towards Reliable Medical LLMs: Benchmarking and Enhancing Confidence Estimation of Large Language Models in Medical Consultation22 Jan 2026
- 2025MoMA: A Mixture-of-Multimodal-Agents Architecture for Enhancing Clinical Prediction Modelling7 Aug 2025
- 2025Scalable Medication Extraction and Discontinuation Identification from Electronic Health Records Using Large Language Models10 Jun 2025
- 2025Rehabilitation Exercise Quality Assessment and Feedback Generation Using Large Language Models with Prompt Engineering23 May 2025
- 2025Multi-modal Integration Analysis of Alzheimer's Disease Using Large Language Models and Knowledge Graphs21 May 2025
- 2025AOR: Anatomical Ontology-Guided Reasoning for Medical Large Multimodal Model in Chest X-Ray Interpretation5 May 2025
- 2025BRIDGE: Benchmarking Large Language Models for Understanding Real-world Clinical Practice Text28 Apr 2025
- 2025LLMs in Disease Diagnosis: A Comparative Study of DeepSeek-R1 and O3 Mini Across Chronic Health Conditions13 Mar 2025