Generating Graphs via Spectral Diffusion
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Abstract (arXiv)
In this paper, we present GGSD, a novel graph generative model based on 1) the spectral decomposition of the graph Laplacian matrix and 2) a diffusion process. Specifically, we propose to use a denoising model to sample eigenvectors and eigenvalues from which we can reconstruct the graph Laplacian and adjacency matrix. Using the Laplacian spectrum allows us to naturally capture the structural characteristics of the graph and work directly in the node space while avoiding the quadratic complexity bottleneck that limits the applicability of other diffusion-based methods. This, in turn, is accomplished by truncating the spectrum, which, as we show in our experiments, results in a faster yet accurate generative process, and by designing a novel transformer-based architecture linear in the number of nodes. Our permutation invariant model can also handle node features by concatenating them to the eigenvectors of each node. An extensive set of experiments on both synthetic and real-world graphs demonstrates the strengths of our model against state-of-the-art alternatives.
Key facts. Cited by 8 papers in the map (data through 14 Oct 2026). Builds on 36 of its 64 references that are in the map. First posted on arXiv 29 Feb 2024.
Builds on
36 of 64 references.
References · 36
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24 more
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- 2022Fast Graph Generation via Spectral Diffusioncited by 36
- 2024Unifying Generation and Prediction on Graphs with Latent Graph Diffusioncited by 25
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Built on by
Citing papers per year: 2024: 1; 2025: 4; 2026: 3.
8 papers.
- 2024Improving Molecular Graph Generation with Flow Matching and Optimal Transportcited by 10
- 2025Bures-Wasserstein Flow Matching for Graph Generationcited by 9
- 2025Graph Guided Diffusion: Unified Guidance for Conditional Graph Generationcited by 5
- 2026Principled Latent Diffusion for Graphs via Laplacian Autoencoderscited by 4
- 2025Graph Generation with Spectral Geodesic Flow Matchingcited by 2
- 2025Permutation-Invariant Spectral Learning via Dyson Diffusioncited by 0
- 2026Informative Graph Structure Learningcited by 0
- 2026A Network Science Perspective on Evaluating Deep Graph Generative Modelscited by 0
- 2026A Network Science Perspective on Evaluating Deep Graph Generative Models1 Sep 2026
- 2026Informative Graph Structure Learning16 May 2026
- 2026Principled Latent Diffusion for Graphs via Laplacian Autoencoders20 Jan 2026
- 2025Permutation-Invariant Spectral Learning via Dyson Diffusion9 Oct 2025
- 2025Graph Generation with Spectral Geodesic Flow Matching2 Oct 2025
- 2025Bures-Wasserstein Flow Matching for Graph Generation16 Jun 2025
- 2025Graph Guided Diffusion: Unified Guidance for Conditional Graph Generation26 May 2025
- 2024Improving Molecular Graph Generation with Flow Matching and Optimal Transport8 Nov 2024