mlsanityData to 7 Oct 2026

GeoTop: Advancing Image Classification with Geometric-Topological Analysis

arXiv 2311.16157 ↗First posted 8 Nov 2023cs.CV cs.LG eess.IVcited by 1

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Abstract (arXiv)

A fundamental challenge in diagnostic imaging is the phenomenon of topological equivalence, where benign and malignant structures share global topology but differ in critical geometric detail, leading to diagnostic errors in both conventional and deep learning models. We introduce GeoTop, a mathematically principled framework that unifies Topological Data Analysis (TDA) and Lipschitz-Killing Curvatures (LKCs) to resolve this ambiguity. Unlike hybrid deep learning approaches, GeoTop provides intrinsic interpretability by fusing the capacity of persistent homology to identify robust topological signatures with the precision of LKCs in quantifying local geometric features such as boundary complexity and surface regularity. The framework's clinical utility is demonstrated through its application to skin lesion classification, where it achieves a consistent accuracy improvement of 3.6% and reduces false positives and negatives by 15-18% compared to conventional single-modality methods. Crucially, GeoTop directly addresses the problem of topological equivalence by incorporating geometric differentiators, providing both theoretical guarantees (via a formal lemma) and empirical validation via controlled benchmarks. Beyond its predictive performance, GeoTop offers inherent mathematical interpretability through persistence diagrams and curvature-based descriptors, computational efficiency for large datasets (processing 224x224 pixel images in less or equal 0.5 s), and demonstrated generalisability to molecular-level data. By unifying topological invariance with geometric sensitivity, GeoTop provides a principled, interpretable solution for advanced shape discrimination in diagnostic imaging.

Key facts. Cited by 1 paper in the map (data through 7 Oct 2026). Builds on 12 of its 43 references that are in the map. First posted on arXiv 8 Nov 2023.

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12 of 43 references.

References · 12

  1. 2017A Survey on Deep Learning in Medical Image Analysiscited by 1,182
  2. 2016Geometric deep learning: going beyond Euclidean datacited by 1,042
  3. 2015Persistence Images: A Stable Vector Representation of Persistent Homologycited by 235
  4. 2017An introduction to Topological Data Analysis: fundamental and practical aspects for data scientistscited by 171
  5. 2023DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genomecited by 139
  6. 2017Deep Learning with Topological Signaturescited by 113
  7. 2017Sliced Wasserstein Kernel for Persistence Diagramscited by 77
  8. 2014A Stable Multi-Scale Kernel for Topological Machine Learningcited by 74
  9. 2019A Topological "Reading" Lesson: Classification of MNIST using TDAcited by 21
  10. 2013Hypothesis Testing for Topological Data Analysiscited by 9
  11. 2017Goodness-of-fit tests for complete spatial randomness based on Minkowski functionals of binary imagescited by 1
  12. 2019Combining Geometric and Topological Information for Boundary Estimationcited by 1

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