Cross-Modal Translation and Alignment for Survival Analysis
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Abstract (arXiv)
With the rapid advances in high-throughput sequencing technologies, the focus of survival analysis has shifted from examining clinical indicators to incorporating genomic profiles with pathological images. However, existing methods either directly adopt a straightforward fusion of pathological features and genomic profiles for survival prediction, or take genomic profiles as guidance to integrate the features of pathological images. The former would overlook intrinsic cross-modal correlations. The latter would discard pathological information irrelevant to gene expression. To address these issues, we present a Cross-Modal Translation and Alignment (CMTA) framework to explore the intrinsic cross-modal correlations and transfer potential complementary information. Specifically, we construct two parallel encoder-decoder structures for multi-modal data to integrate intra-modal information and generate cross-modal representation. Taking the generated cross-modal representation to enhance and recalibrate intra-modal representation can significantly improve its discrimination for comprehensive survival analysis. To explore the intrinsic crossmodal correlations, we further design a cross-modal attention module as the information bridge between different modalities to perform cross-modal interactions and transfer complementary information. Our extensive experiments on five public TCGA datasets demonstrate that our proposed framework outperforms the state-of-the-art methods.
Key facts. Cited by 70 papers in the map (data through 14 Oct 2026). Builds on 13 of its 48 references that are in the map. First posted on arXiv 22 Sep 2023.
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13 of 48 references.
References · 13
- 2018Attention-based Deep Multiple Instance Learningcited by 1,095
- 2020Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Imagescited by 745
- 2017Self-Normalizing Neural Networkscited by 598
- 2021TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classificationcited by 555
- 2021Nystr"omformer: A Nystr"om-Based Algorithm for Approximating Self-Attentioncited by 471
- 2022Scaling Vision Transformers to Gigapixel Images via Hierarchical Self-Supervised Learningcited by 359
- 2020Whole Slide Images based Cancer Survival Prediction using Attention Guided Deep Multiple Instance Learning Networkscited by 178
- 2019Pathomic Fusion: An Integrated Framework for Fusing Histopathology and Genomic Features for Cancer Diagnosis and Prognosiscited by 165
- 2017Machine Learning for Survival Analysis: A Surveycited by 112
- 2020Deep Learning-based Computational Pathology Predicts Origins for Cancers of Unknown Primarycited by 89
- 2019Deep learning-based survival prediction for multiple cancer types using histopathology imagescited by 47
- 2021Deep Orthogonal Fusion: Multimodal Prognostic Biomarker Discovery Integrating Radiology, Pathology, Genomic, and Clinical Datacited by 29
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Citing papers per year: 2023: 1; 2024: 26; 2025: 32; 2026: 11.
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- 2024Feature Re-Embedding: Towards Foundation Model-Level Performance in Computational Pathologycited by 67
- 2024A Multimodal Knowledge-enhanced Whole-slide Pathology Foundation Modelcited by 59
- 2024SlideChat: A Large Vision-Language Assistant for Whole-Slide Pathology Image Understandingcited by 57
- 2024Transcriptomics-guided Slide Representation Learning in Computational Pathologycited by 51
- 2024Multimodal Prototyping for cancer survival predictioncited by 47
- 2024Prototypical Information Bottlenecking and Disentangling for Multimodal Cancer Survival Predictioncited by 41
- 2023CLIP in Medical Imaging: A Surveycited by 40
- 2025PathBench: A comprehensive comparison benchmark for pathology foundation models towards precision oncologycited by 24
- 2024MoME: Mixture of Multimodal Experts for Cancer Survival Predictioncited by 23
- 2024Graph Domain Adaptation with Dual-branch Encoder and Two-level Alignment for Whole Slide Image-based Survival Predictioncited by 20
- 2024FOCUS: Knowledge-enhanced Adaptive Visual Compression for Few-shot Whole Slide Image Classificationcited by 20
- 2024PathM3: A Multimodal Multi-Task Multiple Instance Learning Framework for Whole Slide Image Classification and Captioningcited by 14
38 more
- 2024Interpretable Vision-Language Survival Analysis with Ordinal Inductive Bias for Computational Pathologycited by 14
- 2024Cohort-Individual Cooperative Learning for Multimodal Cancer Survival Analysiscited by 13
- 2025Robust Multimodal Survival Prediction with the Latent Differentiation Conditional Variational AutoEncodercited by 13
- 2025Distilled Prompt Learning for Incomplete Multimodal Survival Predictioncited by 11
- 2025Multimodal Cancer Survival Analysis via Hypergraph Learning with Cross-Modality Rebalancecited by 11
- 2024Multimodal Data Integration for Precision Oncology: Challenges and Future Directionscited by 10
- 2024SurvMamba: State Space Model with Multi-grained Multi-modal Interaction for Survival Predictioncited by 7
- 2024GTP-4o: Modality-prompted Heterogeneous Graph Learning for Omni-modal Biomedical Representationcited by 7
- 2024Histo-Genomic Knowledge Distillation For Cancer Prognosis From Histopathology Whole Slide Imagescited by 6
- 2024Multimodal Cross-Task Interaction for Survival Analysis in Whole Slide Pathological Imagescited by 5
- 2024Multi-modal Data Binding for Survival Analysis Modeling with Incomplete Data and Annotationscited by 5
- 2025SurvAgent: Hierarchical CoT-Enhanced Case Banking and Dichotomy-Based Multi-Agent System for Multimodal Survival Predictioncited by 5
- 2026Act Like a Pathologist: Tissue-Aware Whole Slide Image Reasoningcited by 5
- 2024Knowledge-driven Subspace Fusion and Gradient Coordination for Multi-modal Learningcited by 4
- 2024RankByGene: Gene-Guided Histopathology Representation Learning Through Cross-Modal Ranking Consistencycited by 4
- 2025Memory-Augmented Incomplete Multimodal Survival Prediction via Cross-Slide and Gene-Attentive Hypergraph Learningcited by 4
- 2024AlzheimerRAG: Multimodal Retrieval Augmented Generation for Clinical Use Cases using PubMed articlescited by 3
- 2025Prototype-Guided Cross-Modal Knowledge Enhancement for Adaptive Survival Predictioncited by 3
- 2025AdaMHF: Adaptive Multimodal Hierarchical Fusion for Survival Predictioncited by 3
- 2025MurreNet: Modeling Holistic Multimodal Interactions Between Histopathology and Genomic Profiles for Survival Predictioncited by 3
- 2025PS3: A Multimodal Transformer Integrating Pathology Reports with Histology Images and Biological Pathways for Cancer Survival Predictioncited by 3
- 2024Genomics-guided Representation Learning for Pathologic Pan-cancer Tumor Microenvironment Subtype Predictioncited by 2
- 2024PathoGen-X: A Cross-Modal Genomic Feature Trans-Align Network for Enhanced Survival Prediction from Histopathology Imagescited by 2
- 2025Adaptive Prototype Learning for Multimodal Cancer Survival Analysiscited by 2
- 2025HySurvPred: Multimodal Hyperbolic Embedding with Angle-Aware Hierarchical Contrastive Learning and Uncertainty Constraints for Survival Predictioncited by 2
- 2025Cross-Asset Risk Management: Integrating LLMs for Real-Time Monitoring of Equity, Fixed Income, and Currency Marketscited by 2
- 2025CoC: Chain-of-Cancer based on Cross-Modal Autoregressive Traction for Survival Predictioncited by 2
- 2025Disentangled Multi-modal Learning of Histology and Transcriptomics for Cancer Characterizationcited by 2
- 2025Multi-modal Knowledge Decomposition based Online Distillation for Biomarker Prediction in Breast Cancer Histopathologycited by 2
- 2025A Multimodal Foundation Model to Enhance Generalizability and Data Efficiency for Pan-cancer Prognosis Predictioncited by 2
- 2025ME-Mamba: Multi-Expert Mamba with Efficient Knowledge Capture and Fusion for Multimodal Survival Analysiscited by 2
- 2025ConSurv: Multimodal Continual Learning for Survival Analysiscited by 2
- 2024DSCENet: Dynamic Screening and Clinical-Enhanced Multimodal Fusion for MPNs Subtype Classificationcited by 1
- 2025Genome-Anchored Foundation Model Embeddings Improve Molecular Prediction from Histology Imagescited by 1
- 2025Single Domain Generalization for Multimodal Cross-Cancer Prognosis via Dirac Rebalancer and Distribution Entanglementcited by 1
- 2025impuTMAE: Multi-modal Transformer with Masked Pre-training for Missing Modalities Imputation in Cancer Survival Predictioncited by 1
- 2025Multiple Instance Learning Framework with Masked Hard Instance Mining for Gigapixel Histopathology Image Analysiscited by 1
- 2025A Flow Model with Low-Rank Transformers for Incomplete Multimodal Survival Analysiscited by 1
50 most cited of 70 All 70 (JSON)
- 2026Graph Mamba Survival Analysis Based on Topology-Aware ordering23 May 2026
- 2026Medical Image Understanding Improves Survival Prediction via Visual Instruction Tuning20 Apr 2026
- 2026PRIME: Prototype-Driven Multimodal Pretraining for Cancer Prognosis with Missing Modalities5 Apr 2026
- 2026MUST: Modality-Specific Representation-Aware Transformer for Diffusion-Enhanced Survival Prediction with Missing Modality27 Mar 2026
- 2026HGP-Mamba: Integrating Histology and Generated Protein Features for Mamba-based Multimodal Survival Risk Prediction17 Mar 2026
- 2026Advancing Cancer Prognosis with Hierarchical Fusion of Genomic, Proteomic and Pathology Imaging Data from a Systems Biology Perspective14 Mar 2026
- 2026Layout-Guided Controllable Pathology Image Generation with In-Context Diffusion Transformers11 Mar 2026
- 2026Clinical-Injection Transformer with Domain-Adapted MAE for Lupus Nephritis Prognosis Prediction4 Mar 2026
- 2026Bridging the gap between Performance and Interpretability: An Explainable Disentangled Multimodal Framework for Cancer Survival Prediction2 Mar 2026
- 2026Act Like a Pathologist: Tissue-Aware Whole Slide Image Reasoning28 Feb 2026
- 2026Prototype-driven fusion of pathology and spatial transcriptomics for interpretable survival prediction12 Feb 2026
- 2025LLM-driven Knowledge Enhancement for Multimodal Cancer Survival Prediction16 Dec 2025
38 more
- 2025Structural Prognostic Event Modeling for Multimodal Cancer Survival Analysis30 Nov 2025
- 2025Interpretable Multimodal Cancer Prototyping with Whole Slide Images and Incompletely Paired Genomics26 Nov 2025
- 2025Together, Then Apart: Balancing Alignment and Distinctiveness for Multimodal Survival Analysis22 Nov 2025
- 2025SurvAgent: Hierarchical CoT-Enhanced Case Banking and Dichotomy-Based Multi-Agent System for Multimodal Survival Prediction20 Nov 2025
- 2025ConSurv: Multimodal Continual Learning for Survival Analysis13 Nov 2025
- 2025A Flow Model with Low-Rank Transformers for Incomplete Multimodal Survival Analysis22 Oct 2025
- 2025Multimodal Feature Prototype Learning for Interpretable and Discriminative Cancer Survival Prediction7 Oct 2025
- 2025PS3: A Multimodal Transformer Integrating Pathology Reports with Histology Images and Biological Pathways for Cancer Survival Prediction24 Sep 2025
- 2025ME-Mamba: Multi-Expert Mamba with Efficient Knowledge Capture and Fusion for Multimodal Survival Analysis21 Sep 2025
- 2025A Multimodal Foundation Model to Enhance Generalizability and Data Efficiency for Pan-cancer Prognosis Prediction16 Sep 2025
- 2025Multiple Instance Learning Framework with Masked Hard Instance Mining for Gigapixel Histopathology Image Analysis15 Sep 2025
- 2025Multi-modal Knowledge Decomposition based Online Distillation for Biomarker Prediction in Breast Cancer Histopathology24 Aug 2025
- 2025Disentangled Multi-modal Learning of Histology and Transcriptomics for Cancer Characterization22 Aug 2025
- 2025A Language-Signal-Vision Multimodal Framework for Multitask Cardiac Analysis18 Aug 2025
- 2025impuTMAE: Multi-modal Transformer with Masked Pre-training for Missing Modalities Imputation in Cancer Survival Prediction8 Aug 2025
- 2025Single Domain Generalization for Multimodal Cross-Cancer Prognosis via Dirac Rebalancer and Distribution Entanglement11 Jul 2025
- 2025MurreNet: Modeling Holistic Multimodal Interactions Between Histopathology and Genomic Profiles for Survival Prediction7 Jul 2025
- 2025Genome-Anchored Foundation Model Embeddings Improve Molecular Prediction from Histology Images24 Jun 2025
- 2025Memory-Augmented Incomplete Multimodal Survival Prediction via Cross-Slide and Gene-Attentive Hypergraph Learning24 Jun 2025
- 2025CoC: Chain-of-Cancer based on Cross-Modal Autoregressive Traction for Survival Prediction28 May 2025
- 2025PathBench: A comprehensive comparison benchmark for pathology foundation models towards precision oncology26 May 2025
- 2025Any-to-Any Learning in Computational Pathology via Triplet Multimodal Pretraining19 May 2025
- 2025Multimodal Cancer Survival Analysis via Hypergraph Learning with Cross-Modality Rebalance17 May 2025
- 2025Cross-Asset Risk Management: Integrating LLMs for Real-Time Monitoring of Equity, Fixed Income, and Currency Markets5 Apr 2025
- 2025AdaMHF: Adaptive Multimodal Hierarchical Fusion for Survival Prediction27 Mar 2025
- 2025VGAT: A Cancer Survival Analysis Framework Transitioning from Generative Visual Question Answering to Genomic Reconstruction25 Mar 2025
- 2025HySurvPred: Multimodal Hyperbolic Embedding with Angle-Aware Hierarchical Contrastive Learning and Uncertainty Constraints for Survival Prediction18 Mar 2025
- 2025Prototype-Guided Cross-Modal Knowledge Enhancement for Adaptive Survival Prediction13 Mar 2025
- 2025Robust Multimodal Survival Prediction with the Latent Differentiation Conditional Variational AutoEncoder12 Mar 2025
- 2025Adaptive Prototype Learning for Multimodal Cancer Survival Analysis6 Mar 2025
- 2025Distilled Prompt Learning for Incomplete Multimodal Survival Prediction3 Mar 2025
- 2024AlzheimerRAG: Multimodal Retrieval Augmented Generation for Clinical Use Cases using PubMed articles21 Dec 2024
- 2024RankByGene: Gene-Guided Histopathology Representation Learning Through Cross-Modal Ranking Consistency22 Nov 2024
- 2024FOCUS: Knowledge-enhanced Adaptive Visual Compression for Few-shot Whole Slide Image Classification22 Nov 2024
- 2024Graph Domain Adaptation with Dual-branch Encoder and Two-level Alignment for Whole Slide Image-based Survival Prediction21 Nov 2024
- 2024PathoGen-X: A Cross-Modal Genomic Feature Trans-Align Network for Enhanced Survival Prediction from Histopathology Images1 Nov 2024
- 2024Enhancing Multimodal Medical Image Classification using Cross-Graph Modal Contrastive Learning23 Oct 2024
- 2024SlideChat: A Large Vision-Language Assistant for Whole-Slide Pathology Image Understanding15 Oct 2024
50 newest of 70 All 70 (JSON)
- 2024SurvMamba: State Space Model with Multi-grained Multi-modal Interaction for Survival Predictioncited by 7
- 2025ME-Mamba: Multi-Expert Mamba with Efficient Knowledge Capture and Fusion for Multimodal Survival Analysiscited by 2
- 2026HGP-Mamba: Integrating Histology and Generated Protein Features for Mamba-based Multimodal Survival Risk Predictioncited by 0
- 2026Graph Mamba Survival Analysis Based on Topology-Aware orderingcited by 0
- 2026Graph Mamba Survival Analysis Based on Topology-Aware ordering23 May 2026
- 2026HGP-Mamba: Integrating Histology and Generated Protein Features for Mamba-based Multimodal Survival Risk Prediction17 Mar 2026
- 2025ME-Mamba: Multi-Expert Mamba with Efficient Knowledge Capture and Fusion for Multimodal Survival Analysis21 Sep 2025
- 2024SurvMamba: State Space Model with Multi-grained Multi-modal Interaction for Survival Prediction11 Apr 2024
- 2025ConSurv: Multimodal Continual Learning for Survival Analysis13 Nov 2025
- 2024Feature Re-Embedding: Towards Foundation Model-Level Performance in Computational Pathologycited by 67
- 2024A Multimodal Knowledge-enhanced Whole-slide Pathology Foundation Modelcited by 59
- 2024Transcriptomics-guided Slide Representation Learning in Computational Pathologycited by 51
- 2024Multimodal Prototyping for cancer survival predictioncited by 47
- 2024Prototypical Information Bottlenecking and Disentangling for Multimodal Cancer Survival Predictioncited by 41
- 2023CLIP in Medical Imaging: A Surveycited by 40
- 2025PathBench: A comprehensive comparison benchmark for pathology foundation models towards precision oncologycited by 24
- 2024MoME: Mixture of Multimodal Experts for Cancer Survival Predictioncited by 23
- 2024Graph Domain Adaptation with Dual-branch Encoder and Two-level Alignment for Whole Slide Image-based Survival Predictioncited by 20
- 2024FOCUS: Knowledge-enhanced Adaptive Visual Compression for Few-shot Whole Slide Image Classificationcited by 20
- 2024PathM3: A Multimodal Multi-Task Multiple Instance Learning Framework for Whole Slide Image Classification and Captioningcited by 14
- 2024Interpretable Vision-Language Survival Analysis with Ordinal Inductive Bias for Computational Pathologycited by 14
12 most cited of 59 All 59 (JSON)
- 2026Medical Image Understanding Improves Survival Prediction via Visual Instruction Tuning20 Apr 2026
- 2026PRIME: Prototype-Driven Multimodal Pretraining for Cancer Prognosis with Missing Modalities5 Apr 2026
- 2026MUST: Modality-Specific Representation-Aware Transformer for Diffusion-Enhanced Survival Prediction with Missing Modality27 Mar 2026
- 2026Advancing Cancer Prognosis with Hierarchical Fusion of Genomic, Proteomic and Pathology Imaging Data from a Systems Biology Perspective14 Mar 2026
- 2026Clinical-Injection Transformer with Domain-Adapted MAE for Lupus Nephritis Prognosis Prediction4 Mar 2026
- 2026Bridging the gap between Performance and Interpretability: An Explainable Disentangled Multimodal Framework for Cancer Survival Prediction2 Mar 2026
- 2026Prototype-driven fusion of pathology and spatial transcriptomics for interpretable survival prediction12 Feb 2026
- 2025LLM-driven Knowledge Enhancement for Multimodal Cancer Survival Prediction16 Dec 2025
- 2025Structural Prognostic Event Modeling for Multimodal Cancer Survival Analysis30 Nov 2025
- 2025Interpretable Multimodal Cancer Prototyping with Whole Slide Images and Incompletely Paired Genomics26 Nov 2025
- 2025Together, Then Apart: Balancing Alignment and Distinctiveness for Multimodal Survival Analysis22 Nov 2025
- 2025A Flow Model with Low-Rank Transformers for Incomplete Multimodal Survival Analysis22 Oct 2025
12 newest of 59 All 59 (JSON)