Parameter-Efficient Fine-Tuning of LLaMA for the Clinical Domain
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Abstract (arXiv)
Adapting pretrained language models to novel domains, such as clinical applications, traditionally involves retraining their entire set of parameters. Parameter-Efficient Fine-Tuning (PEFT) techniques for fine-tuning language models significantly reduce computational requirements by selectively fine-tuning small subsets of parameters. In this study, we propose a two-step PEFT framework and evaluate it in the clinical domain. Our approach combines a specialised PEFT adapter layer designed for clinical domain adaptation with another adapter specialised for downstream tasks. We evaluate the framework on multiple clinical outcome prediction datasets, comparing it to clinically trained language models. Our framework achieves a better AUROC score averaged across all clinical downstream tasks compared to clinical language models. In particular, we observe large improvements of 4-5% AUROC in large-scale multilabel classification tasks, such as diagnoses and procedures classification. To our knowledge, this study is the first to provide an extensive empirical analysis of the interplay between PEFT techniques and domain adaptation in an important real-world domain of clinical applications.
Key facts. Cited by 38 papers in the map (data through 7 Oct 2026). Builds on 29 of its 40 references that are in the map. First posted on arXiv 6 Jul 2023.
Builds on
29 of 40 references.
References · 29
- 2018BERT: Pre-training of Deep Bidirectional Transformers for Language Understandingcited by 40,204
- 2019Exploring the Limits of Transfer Learning with a Unified Text-to-Text Transformercited by 14,491
- 2021LoRA: Low-Rank Adaptation of Large Language Modelscited by 14,084
- 2023LLaMA: Open and Efficient Foundation Language Modelscited by 13,958
- 2018GLUE: A Multi-Task Benchmark and Analysis Platform for Natural Language Understandingcited by 4,854
- 2019Parameter-Efficient Transfer Learning for NLPcited by 4,195
- 2021Prefix-Tuning: Optimizing Continuous Prompts for Generationcited by 3,878
- 2021The Power of Scale for Parameter-Efficient Prompt Tuningcited by 3,769
- 2019BioBERT: a pre-trained biomedical language representation model for biomedical text miningcited by 1,935
- 2022Large Language Models Encode Clinical Knowledgecited by 1,807
- 2020Don't Stop Pretraining: Adapt Language Models to Domains and Taskscited by 1,548
- 2019Publicly Available Clinical BERT Embeddingscited by 995
17 more
- 2023LLaMA-Adapter: Efficient Fine-tuning of Language Models with Zero-init Attentioncited by 776
- 2018A Tutorial on Bayesian Optimizationcited by 734
- 2021GPT Understands, Toocited by 715
- 2021P-Tuning v2: Prompt Tuning Can Be Comparable to Fine-tuning Universally Across Scales and Taskscited by 686
- 2022BioGPT: Generative Pre-trained Transformer for Biomedical Text Generation and Miningcited by 531
- 2023Towards Expert-Level Medical Question Answering with Large Language Modelscited by 382
- 2019Transfer Learning in Biomedical Natural Language Processing: An Evaluation of BERT and ELMo on Ten Benchmarking Datasetscited by 298
- 2022GatorTron: A Large Clinical Language Model to Unlock Patient Information from Unstructured Electronic Health Recordscited by 238
- 2023Do We Still Need Clinical Language Models?cited by 97
- 2022Clinical-Longformer and Clinical-BigBird: Transformers for long clinical sequencescited by 67
- 2020UmlsBERT: Clinical Domain Knowledge Augmentation of Contextual Embeddings Using the Unified Medical Language System Metathesauruscited by 53
- 2021Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integrationcited by 43
- 2020Rethinking Distributional Matching Based Domain Adaptationcited by 33
- 2019Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilationcited by 30
- 2021Literature-Augmented Clinical Outcome Predictioncited by 20
- 2021Unsupervised Domain Adaptation with Adaptercited by 14
- 2023UDApter -- Efficient Domain Adaptation Using Adapterscited by 13
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Citing papers per year: 2023: 1; 2024: 20; 2025: 14; 2026: 3.
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- 2023LoraHub: Efficient Cross-Task Generalization via Dynamic LoRA Compositioncited by 359
- 2024A Survey on LoRA of Large Language Modelscited by 67
- 2024A Comprehensive Survey of Large Language Models and Multimodal Large Language Models in Medicinecited by 45
- 2024MedAdapter: Efficient Test-Time Adaptation of Large Language Models towards Medical Reasoningcited by 35
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- 2025Llama-3.1-FoundationAI-SecurityLLM-Base-8B Technical Reportcited by 28
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- 2024Query Performance Prediction using Relevance Judgments Generated by Large Language Modelscited by 18
- 2025Aligned but Blind: Alignment Increases Implicit Bias by Reducing Awareness of Racecited by 15
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- 2024Fusion of Domain-Adapted Vision and Language Models for Medical Visual Question Answeringcited by 5
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- 2025Benchmarking Foundation Models and Parameter-Efficient Fine-Tuning for Prognosis Prediction in Medical Imagingcited by 3
- 2024Edinburgh Clinical NLP at SemEval-2024 Task 2: Fine-tune your model unless you have access to GPT-4cited by 2
- 2024Edinburgh Clinical NLP at MEDIQA-CORR 2024: Guiding Large Language Models with Hintscited by 2
- 2025ELMTEX: Fine-Tuning Large Language Models for Structured Clinical Information Extraction. A Case Study on Clinical Reportscited by 2
- 2024The Right Model for the Job: An Evaluation of Legal Multi-Label Classification Baselinescited by 1
- 2024Assertion Detection Large Language Model In-context Learning LoRA Fine-tuningcited by 1
- 2025QUAD-LLM-MLTC: Large Language Models Ensemble Learning for Healthcare Text Multi-Label Classificationcited by 1
- 2025MSPLoRA: A Multi-Scale Pyramid Low-Rank Adaptation for Efficient Model Fine-Tuningcited by 1
- 2025Aligning Large Language Models with Healthcare Stakeholders: A Pathway to Trustworthy AI Integrationcited by 1
- 2025CliniBench: A Clinical Outcome Prediction Benchmark for Generative and Encoder-Based Language Modelscited by 1
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- 2025Building Patient Journeys in Hebrew: A Language Model for Clinical Timeline Extractioncited by 0
- 2026Trade-offs in Medical LLM Adaptation: An Empirical Study in French QAcited by 0
- 2026Locally Deployable Small Language Models for Emergency Department Decision Support: A Systematic Benchmark of Fine-Tuning Strategiescited by 0
- 2026SynEHR: Joint Modeling Inter-visit Temporal Evolution and Intra-visit Clinical Structure for Longitudinal EHR Synthesiscited by 0
- 2026SynEHR: Joint Modeling Inter-visit Temporal Evolution and Intra-visit Clinical Structure for Longitudinal EHR Synthesis21 Aug 2026
- 2026Locally Deployable Small Language Models for Emergency Department Decision Support: A Systematic Benchmark of Fine-Tuning Strategies10 Aug 2026
- 2026Trade-offs in Medical LLM Adaptation: An Empirical Study in French QA17 Jun 2026
- 2025Building Patient Journeys in Hebrew: A Language Model for Clinical Timeline Extraction12 Dec 2025
- 2025OncoReason: Structuring Clinical Reasoning in LLMs for Robust and Interpretable Survival Prediction20 Oct 2025
- 2025Evolution of meta's llama models and parameter-efficient fine-tuning of large language models: a survey14 Oct 2025
- 2025CliniBench: A Clinical Outcome Prediction Benchmark for Generative and Encoder-Based Language Models30 Sep 2025
- 2025HapticLLaMA: A Multimodal Sensory Language Model for Haptic Captioning8 Aug 2025
- 2025What do Large Language Models know about materials?19 Jul 2025
- 2025Benchmarking Foundation Models and Parameter-Efficient Fine-Tuning for Prognosis Prediction in Medical Imaging23 Jun 2025
- 2025Aligned but Blind: Alignment Increases Implicit Bias by Reducing Awareness of Race30 May 2025
- 2025Aligning Large Language Models with Healthcare Stakeholders: A Pathway to Trustworthy AI Integration2 May 2025
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- 2025Llama-3.1-FoundationAI-SecurityLLM-Base-8B Technical Report28 Apr 2025
- 2025MSPLoRA: A Multi-Scale Pyramid Low-Rank Adaptation for Efficient Model Fine-Tuning27 Mar 2025
- 2025QUAD-LLM-MLTC: Large Language Models Ensemble Learning for Healthcare Text Multi-Label Classification20 Feb 2025
- 2025ELMTEX: Fine-Tuning Large Language Models for Structured Clinical Information Extraction. A Case Study on Clinical Reports8 Feb 2025
- 2025Dialogue is Better Than Monologue: Instructing Medical LLMs via Strategical Conversations29 Jan 2025
- 2024Are Clinical T5 Models Better for Clinical Text?8 Dec 2024
- 2024DeLLiriuM: A large language model for delirium prediction in the ICU using structured EHR22 Oct 2024
- 2024RoQLlama: A Lightweight Romanian Adapted Language Model5 Oct 2024
- 2024Towards Efficient Large Language Models for Scientific Text: A Review20 Aug 2024
- 2024A Comparative Study on Patient Language across Therapeutic Domains for Effective Patient Voice Classification in Online Health Discussions23 Jul 2024
- 2024A Survey on LoRA of Large Language Models8 Jul 2024
- 2024Edinburgh Clinical NLP at MEDIQA-CORR 2024: Guiding Large Language Models with Hints28 May 2024
- 2024Worldwide Federated Training of Language Models23 May 2024
- 2024A Comprehensive Survey of Large Language Models and Multimodal Large Language Models in Medicine14 May 2024
- 2024MedAdapter: Efficient Test-Time Adaptation of Large Language Models towards Medical Reasoning5 May 2024
- 2024Fusion of Domain-Adapted Vision and Language Models for Medical Visual Question Answering24 Apr 2024
- 2024Query Performance Prediction using Relevance Judgments Generated by Large Language Models1 Apr 2024
- 2024Edinburgh Clinical NLP at SemEval-2024 Task 2: Fine-tune your model unless you have access to GPT-430 Mar 2024
- 2024JMLR: Joint Medical LLM and Retrieval Training for Enhancing Reasoning and Professional Question Answering Capability27 Feb 2024
- 2024Me LLaMA: Foundation Large Language Models for Medical Applications20 Feb 2024
- 2024Efficiency at Scale: Investigating the Performance of Diminutive Language Models in Clinical Tasks16 Feb 2024
- 2024Efficient Language Adaptive Pre-training: Extending State-of-the-Art Large Language Models for Polish15 Feb 2024
- 2024Assertion Detection Large Language Model In-context Learning LoRA Fine-tuning31 Jan 2024
- 2024The Right Model for the Job: An Evaluation of Legal Multi-Label Classification Baselines22 Jan 2024
- 2024Data-Centric Foundation Models in Computational Healthcare: A Survey4 Jan 2024
- 2023LoraHub: Efficient Cross-Task Generalization via Dynamic LoRA Composition25 Jul 2023
- 2024MedAdapter: Efficient Test-Time Adaptation of Large Language Models towards Medical Reasoningcited by 35
- 2024JMLR: Joint Medical LLM and Retrieval Training for Enhancing Reasoning and Professional Question Answering Capabilitycited by 32
- 2025OncoReason: Structuring Clinical Reasoning in LLMs for Robust and Interpretable Survival Predictioncited by 1
- 2025OncoReason: Structuring Clinical Reasoning in LLMs for Robust and Interpretable Survival Prediction20 Oct 2025
- 2024MedAdapter: Efficient Test-Time Adaptation of Large Language Models towards Medical Reasoning5 May 2024
- 2024JMLR: Joint Medical LLM and Retrieval Training for Enhancing Reasoning and Professional Question Answering Capability27 Feb 2024
- 2023LoraHub: Efficient Cross-Task Generalization via Dynamic LoRA Compositioncited by 359
- 2024A Survey on LoRA of Large Language Modelscited by 67
- 2025Llama-3.1-FoundationAI-SecurityLLM-Base-8B Technical Reportcited by 28
- 2024Data-Centric Foundation Models in Computational Healthcare: A Surveycited by 27
- 2024Query Performance Prediction using Relevance Judgments Generated by Large Language Modelscited by 18
- 2024Me LLaMA: Foundation Large Language Models for Medical Applicationscited by 10
- 2024RoQLlama: A Lightweight Romanian Adapted Language Modelcited by 7
- 2024Worldwide Federated Training of Language Modelscited by 5
- 2024Efficient Language Adaptive Pre-training: Extending State-of-the-Art Large Language Models for Polishcited by 4
- 2024Efficiency at Scale: Investigating the Performance of Diminutive Language Models in Clinical Taskscited by 4
- 2024DeLLiriuM: A large language model for delirium prediction in the ICU using structured EHRcited by 4
- 2025Evolution of meta's llama models and parameter-efficient fine-tuning of large language models: a surveycited by 4
12 most cited of 30 All 30 (JSON)
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- 2026Locally Deployable Small Language Models for Emergency Department Decision Support: A Systematic Benchmark of Fine-Tuning Strategies10 Aug 2026
- 2026Trade-offs in Medical LLM Adaptation: An Empirical Study in French QA17 Jun 2026
- 2025Building Patient Journeys in Hebrew: A Language Model for Clinical Timeline Extraction12 Dec 2025
- 2025Evolution of meta's llama models and parameter-efficient fine-tuning of large language models: a survey14 Oct 2025
- 2025CliniBench: A Clinical Outcome Prediction Benchmark for Generative and Encoder-Based Language Models30 Sep 2025
- 2025What do Large Language Models know about materials?19 Jul 2025
- 2025Benchmarking Foundation Models and Parameter-Efficient Fine-Tuning for Prognosis Prediction in Medical Imaging23 Jun 2025
- 2025Llama-3.1-FoundationAI-SecurityLLM-Base-8B Technical Report28 Apr 2025
- 2025MSPLoRA: A Multi-Scale Pyramid Low-Rank Adaptation for Efficient Model Fine-Tuning27 Mar 2025
- 2025QUAD-LLM-MLTC: Large Language Models Ensemble Learning for Healthcare Text Multi-Label Classification20 Feb 2025
- 2025ELMTEX: Fine-Tuning Large Language Models for Structured Clinical Information Extraction. A Case Study on Clinical Reports8 Feb 2025
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