Hierarchical Transformer for Scalable Graph Learning
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Abstract (arXiv)
Graph Transformer is gaining increasing attention in the field of machine learning and has demonstrated state-of-the-art performance on benchmarks for graph representation learning. However, as current implementations of Graph Transformer primarily focus on learning representations of small-scale graphs, the quadratic complexity of the global self-attention mechanism presents a challenge for full-batch training when applied to larger graphs. Additionally, conventional sampling-based methods fail to capture necessary high-level contextual information, resulting in a significant loss of performance. In this paper, we introduce the Hierarchical Scalable Graph Transformer (HSGT) as a solution to these challenges. HSGT successfully scales the Transformer architecture to node representation learning tasks on large-scale graphs, while maintaining high performance. By utilizing graph hierarchies constructed through coarsening techniques, HSGT efficiently updates and stores multi-scale information in node embeddings at different levels. Together with sampling-based training methods, HSGT effectively captures and aggregates multi-level information on the hierarchical graph using only Transformer blocks. Empirical evaluations demonstrate that HSGT achieves state-of-the-art performance on large-scale benchmarks with graphs containing millions of nodes with high efficiency.
Key facts. Cited by 17 papers in the map (data through 7 Oct 2026). Builds on 29 of its 48 references that are in the map. First posted on arXiv 4 May 2023.
Builds on
29 of 48 references.
References · 29
- 2017Attention Is All You Needcited by 59,932
- 2021Swin Transformer: Hierarchical Vision Transformer using Shifted Windowscited by 12,082
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
- 2017Graph Attention Networkscited by 8,854
- 2017Inductive Representation Learning on Large Graphscited by 6,284
- 2018How Powerful are Graph Neural Networks?cited by 4,355
- 2020Open Graph Benchmark: Datasets for Machine Learning on Graphscited by 2,148
- 2019Transformer-XL: Attentive Language Models Beyond a Fixed-Length Contextcited by 1,830
- 2019Simplifying Graph Convolutional Networkscited by 1,470
- 2018Self-Attention with Relative Position Representationscited by 1,112
- 2018Pitfalls of Graph Neural Network Evaluationcited by 994
- 2018Predict then Propagate: Graph Neural Networks meet Personalized PageRankcited by 987
17 more
- 2016Revisiting Semi-Supervised Learning with Graph Embeddingscited by 970
- 2018Hierarchical Graph Representation Learning with Differentiable Poolingcited by 786
- 2022Recipe for a General, Powerful, Scalable Graph Transformercited by 702
- 2020A Generalization of Transformer Networks to Graphscited by 653
- 2019GraphSAINT: Graph Sampling Based Inductive Learning Methodcited by 618
- 2018FastGCN: Fast Learning with Graph Convolutional Networks via Importance Samplingcited by 583
- 2019Cluster-GCN: An Efficient Algorithm for Training Deep and Large Graph Convolutional Networkscited by 540
- 2021Rethinking Graph Transformers with Spectral Attentioncited by 468
- 2021Do Transformers Really Perform Bad for Graph Representation?cited by 318
- 2020SIGN: Scalable Inception Graph Neural Networkscited by 283
- 2022Structure-Aware Transformer for Graph Representation Learningcited by 191
- 2018Adaptive Sampling Towards Fast Graph Representation Learningcited by 180
- 2021GNNAutoScale: Scalable and Expressive Graph Neural Networks via Historical Embeddingscited by 90
- 2022Graph Attention Multi-Layer Perceptroncited by 82
- 2022Hierarchical Graph Transformer with Adaptive Node Samplingcited by 72
- 2021Gophormer: Ego-Graph Transformer for Node Classificationcited by 63
- 2019GraphZoom: A multi-level spectral approach for accurate and scalable graph embeddingcited by 58
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Citing papers per year: 2023: 2; 2024: 7; 2025: 6; 2026: 2.
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- 2024Classic GNNs are Strong Baselines: Reassessing GNNs for Node Classificationcited by 83
- 2024Graph Transformers: A Surveycited by 32
- 2025Relational Graph Transformercited by 30
- 2024FairGT: A Fairness-aware Graph Transformercited by 29
- 2025A Survey of Representation Learning, Optimization Strategies, and Applications for Omnidirectional Visioncited by 23
- 2025Relational Deep Learning: Challenges, Foundations and Next-Generation Architecturescited by 22
- 2023Enhancing Graph Transformers with Hierarchical Distance Structural Encodingcited by 16
- 2023Graph Transformers for Large Graphscited by 9
- 2024Next Level Message-Passing with Hierarchical Support Graphscited by 5
- 2024A Scalable and Effective Alternative to Graph Transformerscited by 4
- 2024SpikeGraphormer: A High-Performance Graph Transformer with Spiking Graph Attentioncited by 3
- 2025Are Graph Transformers Necessary? Efficient Long-Range Message Passing with Fractal Nodes in MPNNscited by 3
5 more
- 2026GIST: Gauge-Invariant Spectral Transformers for Scalable Graph Neural Operatorscited by 3
- 2025Toward a Graph Foundation Model: Pre-Training Transformers With Random Walkscited by 2
- 2025Unifying and Enhancing Graph Transformers via a Hierarchical Mask Frameworkcited by 2
- 2024Hi-GMAE: Hierarchical Graph Masked Autoencoderscited by 1
- 2026Avoiding Over-smoothing in Social Media Rumor Detection with Pre-trained Propagation Tree Transformercited by 0
- 2026Avoiding Over-smoothing in Social Media Rumor Detection with Pre-trained Propagation Tree Transformer24 Mar 2026
- 2026GIST: Gauge-Invariant Spectral Transformers for Scalable Graph Neural Operators17 Mar 2026
- 2025Are Graph Transformers Necessary? Efficient Long-Range Message Passing with Fractal Nodes in MPNNs17 Nov 2025
- 2025Unifying and Enhancing Graph Transformers via a Hierarchical Mask Framework21 Oct 2025
- 2025Relational Deep Learning: Challenges, Foundations and Next-Generation Architectures19 Jun 2025
- 2025Toward a Graph Foundation Model: Pre-Training Transformers With Random Walks17 Jun 2025
- 2025Relational Graph Transformer16 May 2025
- 2025A Survey of Representation Learning, Optimization Strategies, and Applications for Omnidirectional Vision11 Feb 2025
- 2024Graph Transformers: A Survey13 Jul 2024
- 2024Next Level Message-Passing with Hierarchical Support Graphs22 Jun 2024
- 2024A Scalable and Effective Alternative to Graph Transformers17 Jun 2024
- 2024Classic GNNs are Strong Baselines: Reassessing GNNs for Node Classification13 Jun 2024
5 more
- 2024Hi-GMAE: Hierarchical Graph Masked Autoencoders17 May 2024
- 2024FairGT: A Fairness-aware Graph Transformer26 Apr 2024
- 2024SpikeGraphormer: A High-Performance Graph Transformer with Spiking Graph Attention21 Mar 2024
- 2023Graph Transformers for Large Graphs18 Dec 2023
- 2023Enhancing Graph Transformers with Hierarchical Distance Structural Encoding22 Aug 2023
- 2024Classic GNNs are Strong Baselines: Reassessing GNNs for Node Classificationcited by 83
- 2024Graph Transformers: A Surveycited by 32
- 2025Relational Graph Transformercited by 30
- 2024FairGT: A Fairness-aware Graph Transformercited by 29
- 2025A Survey of Representation Learning, Optimization Strategies, and Applications for Omnidirectional Visioncited by 23
- 2025Relational Deep Learning: Challenges, Foundations and Next-Generation Architecturescited by 22
- 2023Enhancing Graph Transformers with Hierarchical Distance Structural Encodingcited by 16
- 2023Graph Transformers for Large Graphscited by 9
- 2024Next Level Message-Passing with Hierarchical Support Graphscited by 5
- 2024A Scalable and Effective Alternative to Graph Transformerscited by 4
- 2024SpikeGraphormer: A High-Performance Graph Transformer with Spiking Graph Attentioncited by 3
- 2025Are Graph Transformers Necessary? Efficient Long-Range Message Passing with Fractal Nodes in MPNNscited by 3
12 most cited of 16 All 16 (JSON)
- 2026Avoiding Over-smoothing in Social Media Rumor Detection with Pre-trained Propagation Tree Transformer24 Mar 2026
- 2026GIST: Gauge-Invariant Spectral Transformers for Scalable Graph Neural Operators17 Mar 2026
- 2025Are Graph Transformers Necessary? Efficient Long-Range Message Passing with Fractal Nodes in MPNNs17 Nov 2025
- 2025Relational Deep Learning: Challenges, Foundations and Next-Generation Architectures19 Jun 2025
- 2025Toward a Graph Foundation Model: Pre-Training Transformers With Random Walks17 Jun 2025
- 2025Relational Graph Transformer16 May 2025
- 2025A Survey of Representation Learning, Optimization Strategies, and Applications for Omnidirectional Vision11 Feb 2025
- 2024Graph Transformers: A Survey13 Jul 2024
- 2024Next Level Message-Passing with Hierarchical Support Graphs22 Jun 2024
- 2024A Scalable and Effective Alternative to Graph Transformers17 Jun 2024
- 2024Classic GNNs are Strong Baselines: Reassessing GNNs for Node Classification13 Jun 2024
- 2024Hi-GMAE: Hierarchical Graph Masked Autoencoders17 May 2024
12 newest of 16 All 16 (JSON)