Anatomy-Constrained Contrastive Learning for Synthetic Segmentation without Ground-truth
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Abstract (arXiv)
A large amount of manual segmentation is typically required to train a robust segmentation network so that it can segment objects of interest in a new imaging modality. The manual efforts can be alleviated if the manual segmentation in one imaging modality (e.g., CT) can be utilized to train a segmentation network in another imaging modality (e.g., CBCT/MRI/PET). In this work, we developed an anatomy-constrained contrastive synthetic segmentation network (AccSeg-Net) to train a segmentation network for a target imaging modality without using its ground truth. Specifically, we proposed to use anatomy-constraint and patch contrastive learning to ensure the anatomy fidelity during the unsupervised adaptation, such that the segmentation network can be trained on the adapted image with correct anatomical structure/content. The training data for our AccSeg-Net consists of 1) imaging data paired with segmentation ground-truth in source modality, and 2) unpaired source and target modality imaging data. We demonstrated successful applications on CBCT, MRI, and PET imaging data, and showed superior segmentation performances as compared to previous methods.
Key facts. Cited by 9 papers in the map (data through 7 Oct 2026). Builds on 12 of its 16 references that are in the map. First posted on arXiv 12 Jul 2021.
Builds on
12 of 16 references.
References · 12
- 2015U-Net: Convolutional Networks for Biomedical Image Segmentationcited by 19,604
- 2020A Simple Framework for Contrastive Learning of Visual Representationscited by 11,979
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- 2019The Liver Tumor Segmentation Benchmark (LiTS)cited by 504
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- 2016Unsupervised domain adaptation in brain lesion segmentation with adversarial networkscited by 125
- 2018Concurrent Spatial and Channel Squeeze & Excitation in Fully Convolutional Networkscited by 120
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- 2019C2FNAS: Coarse-to-Fine Neural Architecture Search for 3D Medical Image Segmentationcited by 49
Built on by
Citing papers per year: 2022: 6; 2023: 2; 2024: 1.
9 papers.
- 2022Dissecting Self-Supervised Learning Methods for Surgical Computer Visioncited by 48
- 2022FedMed-GAN: Federated Domain Translation on Unsupervised Cross-Modality Brain Image Synthesiscited by 21
- 2024FPL+: Filtered Pseudo Label-based Unsupervised Cross-Modality Adaptation for 3D Medical Image Segmentationcited by 10
- 2022Cross-Modality Neuroimage Synthesis: A Surveycited by 6
- 2022FedMed-ATL: Misaligned Unpaired Brain Image Synthesis via Affine Transform Losscited by 2
- 2022Single Slice Thigh CT Muscle Group Segmentation with Domain Adaptation and Self-Trainingcited by 1
- 2022M-GenSeg: Domain Adaptation For Target Modality Tumor Segmentation With Annotation-Efficient Supervisioncited by 1
- 2023K-Space-Aware Cross-Modality Score for Synthesized Neuroimage Quality Assessmentcited by 0
- 2023Image-level supervision and self-training for transformer-based cross-modality tumor segmentationcited by 0
- 2024FPL+: Filtered Pseudo Label-based Unsupervised Cross-Modality Adaptation for 3D Medical Image Segmentation7 Apr 2024
- 2023Image-level supervision and self-training for transformer-based cross-modality tumor segmentation17 Sep 2023
- 2023K-Space-Aware Cross-Modality Score for Synthesized Neuroimage Quality Assessment10 Jul 2023
- 2022M-GenSeg: Domain Adaptation For Target Modality Tumor Segmentation With Annotation-Efficient Supervision14 Dec 2022
- 2022Single Slice Thigh CT Muscle Group Segmentation with Domain Adaptation and Self-Training30 Nov 2022
- 2022Dissecting Self-Supervised Learning Methods for Surgical Computer Vision1 Jul 2022
- 2022Cross-Modality Neuroimage Synthesis: A Survey14 Feb 2022
- 2022FedMed-ATL: Misaligned Unpaired Brain Image Synthesis via Affine Transform Loss29 Jan 2022
- 2022FedMed-GAN: Federated Domain Translation on Unsupervised Cross-Modality Brain Image Synthesis22 Jan 2022