From Trees to Continuous Embeddings and Back: Hyperbolic Hierarchical Clustering
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Abstract (arXiv)
Similarity-based Hierarchical Clustering (HC) is a classical unsupervised machine learning algorithm that has traditionally been solved with heuristic algorithms like Average-Linkage. Recently, Dasgupta reframed HC as a discrete optimization problem by introducing a global cost function measuring the quality of a given tree. In this work, we provide the first continuous relaxation of Dasgupta's discrete optimization problem with provable quality guarantees. The key idea of our method, HypHC, is showing a direct correspondence from discrete trees to continuous representations (via the hyperbolic embeddings of their leaf nodes) and back (via a decoding algorithm that maps leaf embeddings to a dendrogram), allowing us to search the space of discrete binary trees with continuous optimization. Building on analogies between trees and hyperbolic space, we derive a continuous analogue for the notion of lowest common ancestor, which leads to a continuous relaxation of Dasgupta's discrete objective. We can show that after decoding, the global minimizer of our continuous relaxation yields a discrete tree with a (1 + epsilon)-factor approximation for Dasgupta's optimal tree, where epsilon can be made arbitrarily small and controls optimization challenges. We experimentally evaluate HypHC on a variety of HC benchmarks and find that even approximate solutions found with gradient descent have superior clustering quality than agglomerative heuristics or other gradient based algorithms. Finally, we highlight the flexibility of HypHC using end-to-end training in a downstream classification task.
Key facts. Cited by 65 papers in the map (data through 7 Oct 2026). First posted on arXiv 1 Oct 2020.
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Citing papers per year: 2021: 11; 2022: 7; 2023: 18; 2024: 7; 2025: 13; 2026: 9.
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- 2021Hyperbolic Deep Neural Networks: A Surveycited by 138
- 2023Hyperbolic Deep Learning in Computer Vision: A Surveycited by 72
- 2021A Hyperbolic-to-Hyperbolic Graph Convolutional Networkcited by 53
- 2021HoroPCA: Hyperbolic Dimensionality Reduction via Horospherical Projectionscited by 47
- 2023HYperbolic Self-Paced Learning for Self-Supervised Skeleton-based Action Representationscited by 42
- 2022HIER: Metric Learning Beyond Class Labels via Hierarchical Regularizationcited by 26
- 2021Geometry-aware Bayesian Optimization in Robotics using Riemannian Mat'ern Kernelscited by 24
- 2023Poincar'e ResNetcited by 24
- 2021Symmetric Spaces for Graph Embeddings: A Finsler-Riemannian Approachcited by 23
- 2024LSEnet: Lorentz Structural Entropy Neural Network for Deep Graph Clusteringcited by 20
- 2022Contrastive Multi-view Hyperbolic Hierarchical Clusteringcited by 19
- 2023Hyperbolic Diffusion Embedding and Distance for Hierarchical Representation Learningcited by 18
38 more
- 2023Hyperbolic Active Learning for Semantic Segmentation under Domain Shiftcited by 18
- 2021Neural Distance Embeddings for Biological Sequencescited by 17
- 2021Generalization Error Bound for Hyperbolic Ordinal Embeddingcited by 12
- 2022Small Transformers Compute Universal Metric Embeddingscited by 12
- 2021Supervised Tree-Wasserstein Distancecited by 10
- 2022Bringing motion taxonomies to continuous domains via GPLVM on hyperbolic manifoldscited by 9
- 2023GeoPhy: Differentiable Phylogenetic Inference via Geometric Gradients of Tree Topologiescited by 9
- 2023Hyperbolic Random Forestscited by 9
- 2023Fast hyperboloid decision tree algorithmscited by 7
- 2021Switch Spaces: Learning Product Spaces with Sparse Gatingcited by 6
- 2023Hyperbolic vs Euclidean Embeddings in Few-Shot Learning: Two Sides of the Same Coincited by 6
- 2025Low-distortion and GPU-compatible Tree Embeddings in Hyperbolic Spacecited by 6
- 2024Tree-Wasserstein Distance for High Dimensional Data with a Latent Feature Hierarchycited by 5
- 2022AMCAD: Adaptive Mixed-Curvature Representation based Advertisement Retrieval Systemcited by 4
- 2023Hyperbolic Geometry in Computer Vision: A Surveycited by 4
- 2023SINCERE: Sequential Interaction Networks representation learning on Co-Evolving RiEmannian manifoldscited by 4
- 2023Improving Heterogeneous Graph Learning with Weighted Mixed-Curvature Product Manifoldcited by 4
- 2025ASIL: Augmented Structural Information Learning for Deep Graph Clustering in Hyperbolic Spacecited by 4
- 2021Learning phylogenetic trees as hyperbolic point configurationscited by 3
- 2022HyperAid: Denoising in hyperbolic spaces for tree-fitting and hierarchical clusteringcited by 3
- 2023Enhancing Group Fairness in Online Settings Using Oblique Decision Forestscited by 3
- 2024Low-dimensional approximations of the conditional law of Volterra processes: a non-positive curvature approachcited by 3
- 2024From Logits to Hierarchies: Hierarchical Clustering made Simplecited by 3
- 2025Hyperbolic Genome Embeddingscited by 3
- 2025Hyperbolic Continuous Structural Entropy for Hierarchical Clusteringcited by 3
- 2022Cross-lingual Word Embeddings in Hyperbolic Spacecited by 2
- 2023CEO: Corpus-based Open-Domain Event Ontology Inductioncited by 2
- 2023Unsupervised Feature Learning with Emergent Data-Driven Prototypicalitycited by 2
- 2023Normed Spaces for Graph Embeddingcited by 2
- 2026Uncertainty-guided Compositional Alignment with Part-to-Whole Semantic Representativeness in Hyperbolic Vision-Language Modelscited by 2
- 2021Exact and Approximate Hierarchical Clustering Using A*cited by 1
- 2023Levenshtein Distance Embedding with Poisson Regression for DNA Storagecited by 1
- 2025Predicate Hierarchies Improve Few-Shot State Classificationcited by 1
- 2025Hyperbolic Residual Quantization: Discrete Representations for Data with Latent Hierarchiescited by 1
- 2025The Complexity of Finding Local Optima in Contrastive Learningcited by 1
- 2025Randomized HyperSteiner: A Stochastic Delaunay Triangulation Heuristic for the Hyperbolic Steiner Minimal Treecited by 1
- 2025Siegel Neural Networkscited by 1
- 2023Federated Classification in Hyperbolic Spaces via Secure Aggregation of Convex Hullscited by 0
50 most cited of 65 All 65 (JSON)
- 2026Continuous Optimization for p-adic Models21 Sep 2026
- 2026Hyperbolic Latent Geometry for Tree-Structured Prototype Networks: A Local-vs-Global Trade-off25 Aug 2026
- 2026Remember Smarter: Visual History Compressor and Hyperbolic Experience Space for Robotic Memory15 Aug 2026
- 2026Semi-Supervised Hyperbolic Hierarchical Clustering with Set-Level Structural Priors1 Jun 2026
- 2026H2G: Hierarchy-Aware Hyperbolic Grouping for 3D Scenes12 May 2026
- 2026Classification Fields: Arbitrarily Fine Recursive Hierarchical Clustering From Few Examples8 May 2026
- 2026Hierarchical Abstract Tree for Cross-Document Retrieval-Augmented Generation1 May 2026
- 2026Uncertainty-guided Compositional Alignment with Part-to-Whole Semantic Representativeness in Hyperbolic Vision-Language Models23 Mar 2026
- 2026Learning Action Hierarchies via Hybrid Geometric Diffusion5 Jan 2026
- 2025Hyperbolic Gaussian Blurring Mean Shift: A Statistical Mode-Seeking Framework for Clustering in Curved Spaces12 Dec 2025
- 2025Hyperbolic Continuous Structural Entropy for Hierarchical Clustering29 Nov 2025
- 2025Siegel Neural Networks12 Nov 2025
38 more
- 2025Randomized HyperSteiner: A Stochastic Delaunay Triangulation Heuristic for the Hyperbolic Steiner Minimal Tree10 Oct 2025
- 2025Combined Hyperbolic and Euclidean Soft Triple Loss Beyond the Single Space Deep Metric Learning7 Oct 2025
- 2025Taxonomy-aware Dynamic Motion Generation on Hyperbolic Manifolds25 Sep 2025
- 2025The Complexity of Finding Local Optima in Contrastive Learning21 Sep 2025
- 2025Hyperbolic Genome Embeddings29 Jul 2025
- 2025Hyperbolic Residual Quantization: Discrete Representations for Data with Latent Hierarchies18 May 2025
- 2025ASIL: Augmented Structural Information Learning for Deep Graph Clustering in Hyperbolic Space14 Apr 2025
- 2025Low-distortion and GPU-compatible Tree Embeddings in Hyperbolic Space24 Feb 2025
- 2025Influence Strength Estimation in Hyperbolic Space for Social Influence Maximization19 Feb 2025
- 2025Predicate Hierarchies Improve Few-Shot State Classification18 Feb 2025
- 2024Tree-Wasserstein Distance for High Dimensional Data with a Latent Feature Hierarchy28 Oct 2024
- 2024From Logits to Hierarchies: Hierarchical Clustering made Simple10 Oct 2024
- 2024Fitting trees to ℓ1-hyperbolic distances2 Sep 2024
- 2024Low-dimensional approximations of the conditional law of Volterra processes: a non-positive curvature approach30 May 2024
- 2024Learning Visual-Semantic Subspace Representations25 May 2024
- 2024LSEnet: Lorentz Structural Entropy Neural Network for Deep Graph Clustering20 May 2024
- 2024Tempered Calculus for ML: Application to Hyperbolic Model Embedding6 Feb 2024
- 2023Levenshtein Distance Embedding with Poisson Regression for DNA Storage13 Dec 2023
- 2023Normed Spaces for Graph Embedding3 Dec 2023
- 2023Fast hyperboloid decision tree algorithms20 Oct 2023
- 2023Enhancing Group Fairness in Online Settings Using Oblique Decision Forests17 Oct 2023
- 2023Hyperbolic vs Euclidean Embeddings in Few-Shot Learning: Two Sides of the Same Coin18 Sep 2023
- 2023Hyperbolic Random Forests25 Aug 2023
- 2023Federated Classification in Hyperbolic Spaces via Secure Aggregation of Convex Hulls14 Aug 2023
- 2023Improving Heterogeneous Graph Learning with Weighted Mixed-Curvature Product Manifold10 Jul 2023
- 2023GeoPhy: Differentiable Phylogenetic Inference via Geometric Gradients of Tree Topologies7 Jul 2023
- 2023Unsupervised Feature Learning with Emergent Data-Driven Prototypicality4 Jul 2023
- 2023Hyperbolic Active Learning for Semantic Segmentation under Domain Shift19 Jun 2023
- 2023Hyperbolic Diffusion Embedding and Distance for Hierarchical Representation Learning30 May 2023
- 2023CEO: Corpus-based Open-Domain Event Ontology Induction22 May 2023
- 2023Hyperbolic Deep Learning in Computer Vision: A Survey11 May 2023
- 2023SINCERE: Sequential Interaction Networks representation learning on Co-Evolving RiEmannian manifolds6 May 2023
- 2023Hyperbolic Geometry in Computer Vision: A Survey21 Apr 2023
- 2023Poincar'e ResNet24 Mar 2023
- 2023HYperbolic Self-Paced Learning for Self-Supervised Skeleton-based Action Representations10 Mar 2023
- 2022HIER: Metric Learning Beyond Class Labels via Hierarchical Regularization29 Dec 2022
- 2022Bringing motion taxonomies to continuous domains via GPLVM on hyperbolic manifolds4 Oct 2022
- 2022Small Transformers Compute Universal Metric Embeddings14 Sep 2022
50 newest of 65 All 65 (JSON)
- 2021Hyperbolic Deep Neural Networks: A Surveycited by 138
- 2023Hyperbolic Deep Learning in Computer Vision: A Surveycited by 72
- 2021A Hyperbolic-to-Hyperbolic Graph Convolutional Networkcited by 53
- 2021HoroPCA: Hyperbolic Dimensionality Reduction via Horospherical Projectionscited by 47
- 2023HYperbolic Self-Paced Learning for Self-Supervised Skeleton-based Action Representationscited by 42
- 2022HIER: Metric Learning Beyond Class Labels via Hierarchical Regularizationcited by 26
- 2021Geometry-aware Bayesian Optimization in Robotics using Riemannian Mat'ern Kernelscited by 24
- 2023Poincar'e ResNetcited by 24
- 2021Symmetric Spaces for Graph Embeddings: A Finsler-Riemannian Approachcited by 23
- 2024LSEnet: Lorentz Structural Entropy Neural Network for Deep Graph Clusteringcited by 20
- 2022Contrastive Multi-view Hyperbolic Hierarchical Clusteringcited by 19
- 2023Hyperbolic Diffusion Embedding and Distance for Hierarchical Representation Learningcited by 18
12 most cited of 62 All 62 (JSON)
- 2026Continuous Optimization for p-adic Models21 Sep 2026
- 2026Hyperbolic Latent Geometry for Tree-Structured Prototype Networks: A Local-vs-Global Trade-off25 Aug 2026
- 2026Semi-Supervised Hyperbolic Hierarchical Clustering with Set-Level Structural Priors1 Jun 2026
- 2026H2G: Hierarchy-Aware Hyperbolic Grouping for 3D Scenes12 May 2026
- 2026Classification Fields: Arbitrarily Fine Recursive Hierarchical Clustering From Few Examples8 May 2026
- 2026Learning Action Hierarchies via Hybrid Geometric Diffusion5 Jan 2026
- 2025Hyperbolic Gaussian Blurring Mean Shift: A Statistical Mode-Seeking Framework for Clustering in Curved Spaces12 Dec 2025
- 2025Hyperbolic Continuous Structural Entropy for Hierarchical Clustering29 Nov 2025
- 2025Siegel Neural Networks12 Nov 2025
- 2025Randomized HyperSteiner: A Stochastic Delaunay Triangulation Heuristic for the Hyperbolic Steiner Minimal Tree10 Oct 2025
- 2025Combined Hyperbolic and Euclidean Soft Triple Loss Beyond the Single Space Deep Metric Learning7 Oct 2025
- 2025Taxonomy-aware Dynamic Motion Generation on Hyperbolic Manifolds25 Sep 2025
12 newest of 62 All 62 (JSON)