mlsanityData to 14 Oct 2026

Graph Residual Flow for Molecular Graph Generation

arXiv 1909.13521 ↗First posted 30 Sep 2019cs.LG stat.MLcited by 23

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Abstract (arXiv)

Statistical generative models for molecular graphs attract attention from many researchers from the fields of bio- and chemo-informatics. Among these models, invertible flow-based approaches are not fully explored yet. In this paper, we propose a powerful invertible flow for molecular graphs, called graph residual flow (GRF). The GRF is based on residual flows, which are known for more flexible and complex non-linear mappings than traditional coupling flows. We theoretically derive non-trivial conditions such that GRF is invertible, and present a way of keeping the entire flows invertible throughout the training and sampling. Experimental results show that a generative model based on the proposed GRF achieves comparable generation performance, with much smaller number of trainable parameters compared to the existing flow-based model.

Key facts. Cited by 23 papers in the map (data through 14 Oct 2026). First posted on arXiv 30 Sep 2019.

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Citing papers per year: 2021: 6; 2022: 9; 2023: 2; 2024: 4; 2025: 2.

23 papers.

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  1. 2021GraphDF: A Discrete Flow Model for Molecular Graph Generationcited by 180
  2. 2021GraphEBM: Molecular Graph Generation with Energy-Based Modelscited by 85
  3. 2022A Survey on Deep Graph Generation: Methods and Applicationscited by 69
  4. 2022MolGenSurvey: A Systematic Survey in Machine Learning Models for Molecule Designcited by 66
  5. 2021Differentiable Scaffolding Tree for Molecular Optimizationcited by 53
  6. 2021Artificial Intelligence in Drug Discovery: Applications and Techniquescited by 28
  7. 2023Data-centric Graph Learning: A Surveycited by 22
  8. 2022Target-aware Molecular Graph Generationcited by 18
  9. 2022Modular Flows: Differential Molecular Generationcited by 11
  10. 2024LLM-Based Multi-Agent Systems are Scalable Graph Generative Modelscited by 11
  11. 2022FastFlows: Flow-Based Models for Molecular Graph Generationcited by 9
  12. 2022Conditional β-VAE for De Novo Molecular Generationcited by 8
11 more
  1. 2023Molecule Design by Latent Space Energy-Based Modeling and Gradual Distribution Shiftingcited by 8
  2. 2025Gradient GA: Gradient Genetic Algorithm for Drug Molecular Designcited by 4
  3. 2024Overcoming Order in Autoregressive Graph Generationcited by 3
  4. 2025Fine-Grained Traffic Inference from Road to Lane via Spatio-Temporal Graph Node Generationcited by 3
  5. 2022Large-Scale Auto-Regressive Modeling Of Street Networkscited by 2
  6. 2024GraphSPNs: Sum-Product Networks Benefit From Canonical Orderingscited by 2
  7. 2021An In-depth Summary of Recent Artificial Intelligence Applications in Drug Designcited by 1
  8. 2021HelixMO: Sample-Efficient Molecular Optimization in Scene-Sensitive Latent Spacecited by 1
  9. 2024Physics-integrated generative modeling using attentive planar normalizing flow based variational autoencodercited by 1
  10. 2022Hybrid Quantum Generative Adversarial Networks for Molecular Simulation and Drug Discoverycited by 0
  11. 2022An open unified deep graph learning framework for discovering drug leadscited by 0