Graph Residual Flow for Molecular Graph Generation
Not on the map. Why?
Abstract (arXiv)
Statistical generative models for molecular graphs attract attention from many researchers from the fields of bio- and chemo-informatics. Among these models, invertible flow-based approaches are not fully explored yet. In this paper, we propose a powerful invertible flow for molecular graphs, called graph residual flow (GRF). The GRF is based on residual flows, which are known for more flexible and complex non-linear mappings than traditional coupling flows. We theoretically derive non-trivial conditions such that GRF is invertible, and present a way of keeping the entire flows invertible throughout the training and sampling. Experimental results show that a generative model based on the proposed GRF achieves comparable generation performance, with much smaller number of trainable parameters compared to the existing flow-based model.
Key facts. Cited by 23 papers in the map (data through 14 Oct 2026). First posted on arXiv 30 Sep 2019.
Builds on
No reference list yet.
Built on by
Citing papers per year: 2021: 6; 2022: 9; 2023: 2; 2024: 4; 2025: 2.
23 papers.
Sort:
By area:
- 2021GraphDF: A Discrete Flow Model for Molecular Graph Generationcited by 180
- 2021GraphEBM: Molecular Graph Generation with Energy-Based Modelscited by 85
- 2022A Survey on Deep Graph Generation: Methods and Applicationscited by 69
- 2022MolGenSurvey: A Systematic Survey in Machine Learning Models for Molecule Designcited by 66
- 2021Differentiable Scaffolding Tree for Molecular Optimizationcited by 53
- 2021Artificial Intelligence in Drug Discovery: Applications and Techniquescited by 28
- 2023Data-centric Graph Learning: A Surveycited by 22
- 2022Target-aware Molecular Graph Generationcited by 18
- 2022Modular Flows: Differential Molecular Generationcited by 11
- 2024LLM-Based Multi-Agent Systems are Scalable Graph Generative Modelscited by 11
- 2022FastFlows: Flow-Based Models for Molecular Graph Generationcited by 9
- 2022Conditional β-VAE for De Novo Molecular Generationcited by 8
11 more
- 2023Molecule Design by Latent Space Energy-Based Modeling and Gradual Distribution Shiftingcited by 8
- 2025Gradient GA: Gradient Genetic Algorithm for Drug Molecular Designcited by 4
- 2024Overcoming Order in Autoregressive Graph Generationcited by 3
- 2025Fine-Grained Traffic Inference from Road to Lane via Spatio-Temporal Graph Node Generationcited by 3
- 2022Large-Scale Auto-Regressive Modeling Of Street Networkscited by 2
- 2024GraphSPNs: Sum-Product Networks Benefit From Canonical Orderingscited by 2
- 2021An In-depth Summary of Recent Artificial Intelligence Applications in Drug Designcited by 1
- 2021HelixMO: Sample-Efficient Molecular Optimization in Scene-Sensitive Latent Spacecited by 1
- 2024Physics-integrated generative modeling using attentive planar normalizing flow based variational autoencodercited by 1
- 2022Hybrid Quantum Generative Adversarial Networks for Molecular Simulation and Drug Discoverycited by 0
- 2022An open unified deep graph learning framework for discovering drug leadscited by 0
- 2025Fine-Grained Traffic Inference from Road to Lane via Spatio-Temporal Graph Node Generation25 Jul 2025
- 2025Gradient GA: Gradient Genetic Algorithm for Drug Molecular Design14 Feb 2025
- 2024LLM-Based Multi-Agent Systems are Scalable Graph Generative Models13 Oct 2024
- 2024GraphSPNs: Sum-Product Networks Benefit From Canonical Orderings18 Aug 2024
- 2024Physics-integrated generative modeling using attentive planar normalizing flow based variational autoencoder18 Apr 2024
- 2024Overcoming Order in Autoregressive Graph Generation4 Feb 2024
- 2023Data-centric Graph Learning: A Survey8 Oct 2023
- 2023Molecule Design by Latent Space Energy-Based Modeling and Gradual Distribution Shifting9 Jun 2023
- 2022Hybrid Quantum Generative Adversarial Networks for Molecular Simulation and Drug Discovery15 Dec 2022
- 2022An open unified deep graph learning framework for discovering drug leads6 Dec 2022
- 2022Modular Flows: Differential Molecular Generation12 Oct 2022
- 2022Large-Scale Auto-Regressive Modeling Of Street Networks1 Sep 2022
11 more
- 2022Conditional β-VAE for De Novo Molecular Generation1 May 2022
- 2022MolGenSurvey: A Systematic Survey in Machine Learning Models for Molecule Design28 Mar 2022
- 2022A Survey on Deep Graph Generation: Methods and Applications13 Mar 2022
- 2022Target-aware Molecular Graph Generation10 Feb 2022
- 2022FastFlows: Flow-Based Models for Molecular Graph Generation28 Jan 2022
- 2021HelixMO: Sample-Efficient Molecular Optimization in Scene-Sensitive Latent Space30 Nov 2021
- 2021An In-depth Summary of Recent Artificial Intelligence Applications in Drug Design10 Oct 2021
- 2021Differentiable Scaffolding Tree for Molecular Optimization22 Sep 2021
- 2021Artificial Intelligence in Drug Discovery: Applications and Techniques9 Jun 2021
- 2021GraphDF: A Discrete Flow Model for Molecular Graph Generation1 Feb 2021
- 2021GraphEBM: Molecular Graph Generation with Energy-Based Models31 Jan 2021
- 2021GraphDF: A Discrete Flow Model for Molecular Graph Generationcited by 180
- 2021GraphEBM: Molecular Graph Generation with Energy-Based Modelscited by 85
- 2022A Survey on Deep Graph Generation: Methods and Applicationscited by 69
- 2022MolGenSurvey: A Systematic Survey in Machine Learning Models for Molecule Designcited by 66
- 2021Differentiable Scaffolding Tree for Molecular Optimizationcited by 53
- 2021Artificial Intelligence in Drug Discovery: Applications and Techniquescited by 28
- 2023Data-centric Graph Learning: A Surveycited by 22
- 2022Target-aware Molecular Graph Generationcited by 18
- 2022Modular Flows: Differential Molecular Generationcited by 11
- 2022FastFlows: Flow-Based Models for Molecular Graph Generationcited by 9
- 2022Conditional β-VAE for De Novo Molecular Generationcited by 8
- 2023Molecule Design by Latent Space Energy-Based Modeling and Gradual Distribution Shiftingcited by 8
12 most cited of 22 All 22 (JSON)
- 2025Fine-Grained Traffic Inference from Road to Lane via Spatio-Temporal Graph Node Generation25 Jul 2025
- 2025Gradient GA: Gradient Genetic Algorithm for Drug Molecular Design14 Feb 2025
- 2024GraphSPNs: Sum-Product Networks Benefit From Canonical Orderings18 Aug 2024
- 2024Physics-integrated generative modeling using attentive planar normalizing flow based variational autoencoder18 Apr 2024
- 2024Overcoming Order in Autoregressive Graph Generation4 Feb 2024
- 2023Data-centric Graph Learning: A Survey8 Oct 2023
- 2023Molecule Design by Latent Space Energy-Based Modeling and Gradual Distribution Shifting9 Jun 2023
- 2022Hybrid Quantum Generative Adversarial Networks for Molecular Simulation and Drug Discovery15 Dec 2022
- 2022An open unified deep graph learning framework for discovering drug leads6 Dec 2022
- 2022Modular Flows: Differential Molecular Generation12 Oct 2022
- 2022Large-Scale Auto-Regressive Modeling Of Street Networks1 Sep 2022
- 2022Conditional β-VAE for De Novo Molecular Generation1 May 2022
12 newest of 22 All 22 (JSON)