Quantifying Point-Prediction Uncertainty in Neural Networks via Residual Estimation with an I/O Kernel
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Abstract (arXiv)
Neural Networks (NNs) have been extensively used for a wide spectrum of real-world regression tasks, where the goal is to predict a numerical outcome such as revenue, effectiveness, or a quantitative result. In many such tasks, the point prediction is not enough: the uncertainty (i.e. risk or confidence) of that prediction must also be estimated. Standard NNs, which are most often used in such tasks, do not provide uncertainty information. Existing approaches address this issue by combining Bayesian models with NNs, but these models are hard to implement, more expensive to train, and usually do not predict as accurately as standard NNs. In this paper, a new framework (RIO) is developed that makes it possible to estimate uncertainty in any pretrained standard NN. The behavior of the NN is captured by modeling its prediction residuals with a Gaussian Process, whose kernel includes both the NN's input and its output. The framework is evaluated in twelve real-world datasets, where it is found to (1) provide reliable estimates of uncertainty, (2) reduce the error of the point predictions, and (3) scale well to large datasets. Given that RIO can be applied to any standard NN without modifications to model architecture or training pipeline, it provides an important ingredient for building real-world NN applications.
Key facts. Cited by 19 papers in the map (data through 7 Oct 2026). First posted on arXiv 3 Jun 2019.
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Citing papers per year: 2021: 5; 2022: 4; 2023: 4; 2024: 3; 2025: 3.
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- 2022Image-to-Image Regression with Distribution-Free Uncertainty Quantification and Applications in Imagingcited by 107
- 2021Quantifying Uncertainty in Deep Spatiotemporal Forecastingcited by 48
- 2024Uncertainty Quantification Metrics for Deep Regressioncited by 16
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- 2022EVOTER: Evolution of Transparent Explainable Rule-setscited by 2
- 2024Beyond the Norms: Detecting Prediction Errors in Regression Modelscited by 2
- 2022Scheduling Planting Time Through Developing an Optimization Model and Analysis of Time Series Growing Degree Unitscited by 1
- 2023Learning Mixture Structure on Multi-Source Time Series for Probabilistic Forecastingcited by 1
- 2023Discovering Effective Policies for Land-Use Planning with Neuroevolutioncited by 1
7 more
- 2021Uncertainty Surrogates for Deep Learningcited by 0
- 2022Evaluating Point-Prediction Uncertainties in Neural Networks for Drug Discoverycited by 0
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- 2024Unlocking the Potential of Global Human Expertisecited by 0
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- 2025Semantic-Aware Gaussian Process Calibration with Structured Layerwise Kernels for Deep Neural Networkscited by 0
- 2025Adaptive Individual Uncertainty under Out-Of-Distribution Shift with Expert-Routed Conformal Predictioncited by 0
- 2025Adaptive Individual Uncertainty under Out-Of-Distribution Shift with Expert-Routed Conformal Prediction17 Oct 2025
- 2025Semantic-Aware Gaussian Process Calibration with Structured Layerwise Kernels for Deep Neural Networks21 Jul 2025
- 2025Scalable Bayesian Monte Carlo: fast uncertainty estimation beyond deep ensembles19 May 2025
- 2024Unlocking the Potential of Global Human Expertise31 Oct 2024
- 2024Beyond the Norms: Detecting Prediction Errors in Regression Models11 Jun 2024
- 2024Uncertainty Quantification Metrics for Deep Regression7 May 2024
- 2023Discovering Effective Policies for Land-Use Planning with Neuroevolution21 Nov 2023
- 2023Quantification of Predictive Uncertainty via Inference-Time Sampling3 Aug 2023
- 2023CUE: An Uncertainty Interpretation Framework for Text Classifiers Built on Pre-Trained Language Models6 Jun 2023
- 2023Learning Mixture Structure on Multi-Source Time Series for Probabilistic Forecasting22 Feb 2023
- 2022Evaluating Point-Prediction Uncertainties in Neural Networks for Drug Discovery31 Oct 2022
- 2022Scheduling Planting Time Through Developing an Optimization Model and Analysis of Time Series Growing Degree Units2 Jul 2022
7 more
- 2022EVOTER: Evolution of Transparent Explainable Rule-sets21 Apr 2022
- 2022Image-to-Image Regression with Distribution-Free Uncertainty Quantification and Applications in Imaging10 Feb 2022
- 2021Quantifying Uncertainty in Deep Spatiotemporal Forecasting25 May 2021
- 2021Uncertainty-Aware Boosted Ensembling in Multi-Modal Settings21 Apr 2021
- 2021Uncertainty Surrogates for Deep Learning16 Apr 2021
- 2021DeepGLEAM: A hybrid mechanistic and deep learning model for COVID-19 forecasting12 Feb 2021
- 2021A Novel Regression Loss for Non-Parametric Uncertainty Optimization7 Jan 2021
- 2022Image-to-Image Regression with Distribution-Free Uncertainty Quantification and Applications in Imagingcited by 107
- 2021Quantifying Uncertainty in Deep Spatiotemporal Forecastingcited by 48
- 2024Uncertainty Quantification Metrics for Deep Regressioncited by 16
- 2021DeepGLEAM: A hybrid mechanistic and deep learning model for COVID-19 forecastingcited by 11
- 2021A Novel Regression Loss for Non-Parametric Uncertainty Optimizationcited by 4
- 2021Uncertainty-Aware Boosted Ensembling in Multi-Modal Settingscited by 4
- 2023CUE: An Uncertainty Interpretation Framework for Text Classifiers Built on Pre-Trained Language Modelscited by 3
- 2022EVOTER: Evolution of Transparent Explainable Rule-setscited by 2
- 2024Beyond the Norms: Detecting Prediction Errors in Regression Modelscited by 2
- 2022Scheduling Planting Time Through Developing an Optimization Model and Analysis of Time Series Growing Degree Unitscited by 1
- 2023Learning Mixture Structure on Multi-Source Time Series for Probabilistic Forecastingcited by 1
- 2023Discovering Effective Policies for Land-Use Planning with Neuroevolutioncited by 1
12 most cited of 19 All 19 (JSON)
- 2025Adaptive Individual Uncertainty under Out-Of-Distribution Shift with Expert-Routed Conformal Prediction17 Oct 2025
- 2025Semantic-Aware Gaussian Process Calibration with Structured Layerwise Kernels for Deep Neural Networks21 Jul 2025
- 2025Scalable Bayesian Monte Carlo: fast uncertainty estimation beyond deep ensembles19 May 2025
- 2024Unlocking the Potential of Global Human Expertise31 Oct 2024
- 2024Beyond the Norms: Detecting Prediction Errors in Regression Models11 Jun 2024
- 2024Uncertainty Quantification Metrics for Deep Regression7 May 2024
- 2023Discovering Effective Policies for Land-Use Planning with Neuroevolution21 Nov 2023
- 2023Quantification of Predictive Uncertainty via Inference-Time Sampling3 Aug 2023
- 2023CUE: An Uncertainty Interpretation Framework for Text Classifiers Built on Pre-Trained Language Models6 Jun 2023
- 2023Learning Mixture Structure on Multi-Source Time Series for Probabilistic Forecasting22 Feb 2023
- 2022Evaluating Point-Prediction Uncertainties in Neural Networks for Drug Discovery31 Oct 2022
- 2022Scheduling Planting Time Through Developing an Optimization Model and Analysis of Time Series Growing Degree Units2 Jul 2022
12 newest of 19 All 19 (JSON)