Explainability Techniques for Graph Convolutional Networks
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Abstract (arXiv)
Graph Networks are used to make decisions in potentially complex scenarios but it is usually not obvious how or why they made them. In this work, we study the explainability of Graph Network decisions using two main classes of techniques, gradient-based and decomposition-based, on a toy dataset and a chemistry task. Our study sets the ground for future development as well as application to real-world problems.
Key facts. Cited by 160 papers in the map (data through 7 Oct 2026). First posted on arXiv 31 May 2019.
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Citing papers per year: 2021: 24; 2022: 40; 2023: 36; 2024: 31; 2025: 17; 2026: 12.
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- 2021On Explainability of Graph Neural Networks via Subgraph Explorationscited by 280
- 2021Graph Neural Network for Traffic Forecasting: A Surveycited by 260
- 2022Interpretable and Generalizable Graph Learning via Stochastic Attention Mechanismcited by 171
- 2021CF-GNNExplainer: Counterfactual Explanations for Graph Neural Networkscited by 118
- 2022A Comprehensive Survey on Trustworthy Graph Neural Networks: Privacy, Robustness, Fairness, and Explainabilitycited by 118
- 2021Interpretable Deep Learning: Interpretation, Interpretability, Trustworthiness, and Beyondcited by 116
- 2021ProtGNN: Towards Self-Explaining Graph Neural Networkscited by 96
- 2022Trustworthy Graph Neural Networks: Aspects, Methods and Trendscited by 88
- 2022Evaluating Explainability for Graph Neural Networkscited by 85
- 2022Learning and Evaluating Graph Neural Network Explanations based on Counterfactual and Factual Reasoningcited by 78
- 2021Graph-Based Deep Learning for Medical Diagnosis and Analysis: Past, Present and Futurecited by 67
- 2021GraphSVX: Shapley Value Explanations for Graph Neural Networkscited by 63
38 more
- 2022GraphFramEx: Towards Systematic Evaluation of Explainability Methods for Graph Neural Networkscited by 57
- 2022KerGNNs: Interpretable Graph Neural Networks with Graph Kernelscited by 50
- 2022GStarX: Explaining Graph Neural Networks with Structure-Aware Cooperative Gamescited by 42
- 2021A Survey on Graph-Based Deep Learning for Computational Histopathologycited by 41
- 2021Sampling methods for efficient training of graph convolutional networks: A surveycited by 40
- 2021Probing GNN Explainers: A Rigorous Theoretical and Empirical Analysis of GNN Explanation Methodscited by 36
- 2021GCExplainer: Human-in-the-Loop Concept-based Explanations for Graph Neural Networkscited by 35
- 2022Reinforced Causal Explainer for Graph Neural Networkscited by 34
- 2022GNNInterpreter: A Probabilistic Generative Model-Level Explanation for Graph Neural Networkscited by 34
- 2022Explaining the Explainers in Graph Neural Networks: a Comparative Studycited by 34
- 2021MEG: Generating Molecular Counterfactual Explanations for Deep Graph Networkscited by 32
- 2023Joint Learning of Label and Environment Causal Independence for Graph Out-of-Distribution Generalizationcited by 29
- 2023A Survey on Explainability of Graph Neural Networkscited by 28
- 2021Deep Ensembles from a Bayesian Perspectivecited by 27
- 2023DAG Matters! GFlowNets Enhanced Explainer For Graph Neural Networkscited by 27
- 2023TempME: Towards the Explainability of Temporal Graph Neural Networks via Motif Discoverycited by 27
- 2022A Survey of Explainable Graph Neural Networks: Taxonomy and Evaluation Metricscited by 26
- 2022GREASE: Generate Factual and Counterfactual Explanations for GNN-based Recommendationscited by 22
- 2023Counterfactual Learning on Graphs: A Surveycited by 22
- 2021Improving Molecular Graph Neural Network Explainability with Orthonormalization and Induced Sparsitycited by 20
- 2022A Survey of Trustworthy Graph Learning: Reliability, Explainability, and Privacy Protectioncited by 20
- 2022FlowX: Towards Explainable Graph Neural Networks via Message Flowscited by 20
- 2024EXGC: Bridging Efficiency and Explainability in Graph Condensationcited by 20
- 2024PowerGraph: A power grid benchmark dataset for graph neural networkscited by 19
- 2021Bridging the Gap between Spatial and Spectral Domains: A Unified Framework for Graph Neural Networkscited by 18
- 2023DEGREE: Decomposition Based Explanation For Graph Neural Networkscited by 18
- 2023MixupExplainer: Generalizing Explanations for Graph Neural Networks with Data Augmentationcited by 18
- 2024Graph Neural Network Explanations are Fragilecited by 18
- 2022Explainability in Graph Neural Networks: An Experimental Surveycited by 16
- 2022Private Graph Extraction via Feature Explanationscited by 16
- 2023CI-GNN: A Granger Causality-Inspired Graph Neural Network for Interpretable Brain Network-Based Psychiatric Diagnosiscited by 16
- 2023Dynamic Causal Explanation Based Diffusion-Variational Graph Neural Network for Spatio-temporal Forecastingcited by 16
- 2023Towards Robust Fidelity for Evaluating Explainability of Graph Neural Networkscited by 16
- 2022On Structural Explanation of Bias in Graph Neural Networkscited by 15
- 2022Towards Prototype-Based Self-Explainable Graph Neural Networkcited by 14
- 2022Towards Faithful and Consistent Explanations for Graph Neural Networkscited by 13
- 2021Algorithmic Concept-based Explainable Reasoningcited by 12
- 2022Differentially Private Graph Classification with GNNscited by 12
50 most cited of 160 All 160 (JSON)
- 2026RACE: Relation-Level Counterfactual Explanations for Heterogeneous Graph Neural Networks29 Sep 2026
- 2026NICE: Scale-Stable Perturbations for Graph Neural Network Explanations via Noise Corruption17 Aug 2026
- 2026Towards Faithful Graph Explanations with Synergistic Edge Effects via Granular Balls23 Jul 2026
- 2026Relevant Walk Search for Explaining Graph Neural Networks22 May 2026
- 2026B-cos GNNs: Faithful Explanations through Dynamic Linearity19 May 2026
- 2026Estimating Subgraph Importance with Structural Prior Domain Knowledge12 May 2026
- 2026Aitchison Embeddings for Learning Compositional Graph Representations1 May 2026
- 2026Poisoning the Inner Prediction Logic of Graph Neural Networks for Clean-Label Backdoor Attacks5 Mar 2026
- 2026BAED: a New Paradigm for Few-shot Graph Learning with Explanation in the Loop2 Mar 2026
- 2026Routing-Aware Explanations for Mixture of Experts Graph Models in Malware Detection22 Feb 2026
- 2026Is Meta-Path Attention an Explanation? Evidence of Alignment and Decoupling in Heterogeneous GNNs9 Feb 2026
- 2026Parallelizing Node-Level Explainability in Graph Neural Networks8 Jan 2026
38 more
- 2025GRExplainer: A Universal Explanation Method for Temporal Graph Neural Networks28 Dec 2025
- 2025Forget and Explain: Transparent Verification of GNN Unlearning8 Dec 2025
- 2025ARM-Explainer -- Explaining and improving graph neural network predictions for the maximum clique problem using node features and association rule mining28 Nov 2025
- 2025On The Expressive Power of GNN Derivatives2 Oct 2025
- 2025GnnXemplar: Exemplars to Explanations -- Natural Language Rules for Global GNN Interpretability22 Sep 2025
- 2025Database Views as Explanations for Relational Deep Learning11 Sep 2025
- 2025Towards Faithful Class-level Self-explainability in Graph Neural Networks by Subgraph Dependencies15 Aug 2025
- 2025Explainable Attention-Guided Stacked Graph Neural Networks for Malware Detection13 Aug 2025
- 2025Explaining GNN Explanations with Edge Gradients1 Aug 2025
- 2025Explainable Graph Neural Networks via Structural Externalities19 Jul 2025
- 2025DistShap: Scalable GNN Explanations with Distributed Shapley Values27 Jun 2025
- 2025Do Explanations Increase the Risk of Decision Logic Leakage? Explanation-Guided Stealing of Graph Models3 Jun 2025
- 2025Is Your Explanation Reliable: Confidence-Aware Explanation on Graph Neural Networks31 May 2025
- 2025A method for the systematic generation of graph XAI benchmarks via Weisfeiler-Leman coloring18 May 2025
- 2025Interpretability of Graph Neural Networks to Assess Effects of Global Change Drivers on Ecological Networks19 Mar 2025
- 2025GIN-Graph: A Generative Interpretation Network for Model-Level Explanation of Graph Neural Networks8 Mar 2025
- 2025Recent Advances in Malware Detection: Graph Learning and Explainability14 Feb 2025
- 2024MotifGPL: Motif-Enhanced Graph Prototype Learning for Deciphering Urban Social Segregation24 Dec 2024
- 2024BetaExplainer: A Probabilistic Method to Explain Graph Neural Networks16 Dec 2024
- 2024A Comprehensive Guide to Explainable AI: From Classical Models to LLMs1 Dec 2024
- 2024Rethinking Node Representation Interpretation through Relation Coherence1 Nov 2024
- 2024Explanation-Preserving Augmentation for Semi-Supervised Graph Representation Learning16 Oct 2024
- 2024"No Matter What You Do": Purifying GNN Models via Backdoor Unlearning2 Oct 2024
- 2024Controllable Edge-Type-Specific Interpretation in Multi-Relational Graph Neural Networks for Drug Response Prediction30 Aug 2024
- 2024PAGE: Parametric Generative Explainer for Graph Neural Network26 Aug 2024
- 2024xAI-Drop: Don't Use What You Cannot Explain29 Jul 2024
- 2024Graph Neural Network Causal Explanation via Neural Causal Models12 Jul 2024
- 2024Towards Understanding Sensitive and Decisive Patterns in Explainable AI: A Case Study of Model Interpretation in Geometric Deep Learning30 Jun 2024
- 2024On the Feasibility of Fidelity^- for Graph Pruning17 Jun 2024
- 2024Generating Human Understandable Explanations for Node Embeddings11 Jun 2024
- 2024Explainable Graph Neural Networks Under Fire10 Jun 2024
- 2024Faithful and Accurate Self-Attention Attribution for Message Passing Neural Networks via the Computation Tree Viewpoint7 Jun 2024
- 2024Graph Neural Network Explanations are Fragile5 Jun 2024
- 2024Explaining Graph Neural Networks via Structure-aware Interaction Index23 May 2024
- 2024MAGE: Model-Level Graph Neural Networks Explanations via Motif-based Graph Generation21 May 2024
- 2024Higher-order Spatio-temporal Physics-incorporated Graph Neural Network for Multivariate Time Series Imputation16 May 2024
- 2024EiG-Search: Generating Edge-Induced Subgraphs for GNN Explanation in Linear Time2 May 2024
- 2024Explainable Graph Neural Networks for Observation Impact Analysis in Atmospheric State Estimation26 Mar 2024
50 newest of 160 All 160 (JSON)
- 2021On Explainability of Graph Neural Networks via Subgraph Explorationscited by 280
- 2021Graph Neural Network for Traffic Forecasting: A Surveycited by 260
- 2022Interpretable and Generalizable Graph Learning via Stochastic Attention Mechanismcited by 171
- 2021CF-GNNExplainer: Counterfactual Explanations for Graph Neural Networkscited by 118
- 2022A Comprehensive Survey on Trustworthy Graph Neural Networks: Privacy, Robustness, Fairness, and Explainabilitycited by 118
- 2021Interpretable Deep Learning: Interpretation, Interpretability, Trustworthiness, and Beyondcited by 116
- 2021ProtGNN: Towards Self-Explaining Graph Neural Networkscited by 96
- 2022Trustworthy Graph Neural Networks: Aspects, Methods and Trendscited by 88
- 2022Evaluating Explainability for Graph Neural Networkscited by 85
- 2022Learning and Evaluating Graph Neural Network Explanations based on Counterfactual and Factual Reasoningcited by 78
- 2021Graph-Based Deep Learning for Medical Diagnosis and Analysis: Past, Present and Futurecited by 67
- 2021GraphSVX: Shapley Value Explanations for Graph Neural Networkscited by 63
12 most cited of 158 All 158 (JSON)
- 2026RACE: Relation-Level Counterfactual Explanations for Heterogeneous Graph Neural Networks29 Sep 2026
- 2026NICE: Scale-Stable Perturbations for Graph Neural Network Explanations via Noise Corruption17 Aug 2026
- 2026Towards Faithful Graph Explanations with Synergistic Edge Effects via Granular Balls23 Jul 2026
- 2026Relevant Walk Search for Explaining Graph Neural Networks22 May 2026
- 2026B-cos GNNs: Faithful Explanations through Dynamic Linearity19 May 2026
- 2026Estimating Subgraph Importance with Structural Prior Domain Knowledge12 May 2026
- 2026Aitchison Embeddings for Learning Compositional Graph Representations1 May 2026
- 2026Poisoning the Inner Prediction Logic of Graph Neural Networks for Clean-Label Backdoor Attacks5 Mar 2026
- 2026BAED: a New Paradigm for Few-shot Graph Learning with Explanation in the Loop2 Mar 2026
- 2026Is Meta-Path Attention an Explanation? Evidence of Alignment and Decoupling in Heterogeneous GNNs9 Feb 2026
- 2026Parallelizing Node-Level Explainability in Graph Neural Networks8 Jan 2026
- 2025GRExplainer: A Universal Explanation Method for Temporal Graph Neural Networks28 Dec 2025
12 newest of 158 All 158 (JSON)