Is Meta-Path Attention an Explanation? Evidence of Alignment and Decoupling in Heterogeneous GNNs
Not on the map. Why?
Abstract (arXiv)
Meta-path-based heterogeneous graph neural networks aggregate over meta-path-induced views, and their semantic-level attention over meta-path channels is widely used as a narrative for ``which semantics matter.'' We study this assumption empirically by asking: when does meta-path attention reflect meta-path importance, and when can it decouple? A key challenge is that most post-hoc GNN explainers are designed for homogeneous graphs, and naive adaptations to heterogeneous neighborhoods can mix semantics and confound perturbations. To enable a controlled empirical analysis, we introduce MetaXplain, a meta-path-aware post-hoc explanation protocol that applies existing explainers in the native meta-path view domain via (i) view-factorized explanations, (ii) schema-valid channel-wise perturbations, and (iii) fusion-aware attribution, without modifying the underlying predictor. We benchmark representative gradient-, perturbation-, and Shapley-style explainers on ACM, DBLP, and IMDB with HAN and HAN-GCN, comparing against xPath and type-matched random baselines under standard faithfulness metrics. To quantify attention reliability, we propose Meta-Path Attention--Explanation Alignment (MP-AEA), which measures rank correlation between learned attention weights and explanation-derived meta-path contribution scores across random runs. Our results show that meta-path-aware explanations typically outperform random controls, while MP-AEA reveals both high-alignment and statistically significant decoupling regimes depending on the dataset and backbone; moreover, retraining on explanation-induced subgraphs often preserves, and in some noisy regimes improves, predictive performance, suggesting an explanation-as-denoising effect.
Key facts. No citing papers in the map yet (data through 7 Oct 2026). Builds on 17 of its 32 references that are in the map. First posted on arXiv 9 Feb 2026.
Builds on
17 of 32 references.
References · 17
- 2016Grad-CAM: Visual Explanations from Deep Networks via Gradient-based Localizationcited by 6,690
- 2013Deep Inside Convolutional Networks: Visualising Image Classification Models and Saliency Mapscited by 2,348
- 2019Attention is not Explanationcited by 916
- 2019GNNExplainer: Generating Explanations for Graph Neural Networkscited by 735
- 2019Heterogeneous Graph Attention Networkcited by 732
- 2019Graph Neural Networks for Social Recommendationcited by 711
- 2019Attention is not not Explanationcited by 629
- 2019Graph Transformer Networkscited by 520
- 2020MAGNN: Metapath Aggregated Graph Neural Network for Heterogeneous Graph Embeddingcited by 304
- 2021On Explainability of Graph Neural Networks via Subgraph Explorationscited by 280
- 2020PGM-Explainer: Probabilistic Graphical Model Explanations for Graph Neural Networkscited by 210
- 2021Are we really making much progress? Revisiting, benchmarking, and refining heterogeneous graph neural networkscited by 176
5 more
- 2019Explainability Techniques for Graph Convolutional Networkscited by 160
- 2021GraphSVX: Shapley Value Explanations for Graph Neural Networkscited by 63
- 2020Towards Transparent and Explainable Attention Modelscited by 47
- 2024GNNShap: Scalable and Accurate GNN Explanation using Shapley Valuescited by 12
- 2025Automated Heterogeneous Network learning with Non-Recursive Message Passingcited by 2
Built on by
Not cited yet.