Gravity-Inspired Graph Autoencoders for Directed Link Prediction
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Abstract (arXiv)
Graph autoencoders (AE) and variational autoencoders (VAE) recently emerged as powerful node embedding methods. In particular, graph AE and VAE were successfully leveraged to tackle the challenging link prediction problem, aiming at figuring out whether some pairs of nodes from a graph are connected by unobserved edges. However, these models focus on undirected graphs and therefore ignore the potential direction of the link, which is limiting for numerous real-life applications. In this paper, we extend the graph AE and VAE frameworks to address link prediction in directed graphs. We present a new gravity-inspired decoder scheme that can effectively reconstruct directed graphs from a node embedding. We empirically evaluate our method on three different directed link prediction tasks, for which standard graph AE and VAE perform poorly. We achieve competitive results on three real-world graphs, outperforming several popular baselines.
Key facts. Cited by 28 papers in the map (data through 7 Oct 2026). First posted on arXiv 23 May 2019.
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Citing papers per year: 2021: 4; 2022: 8; 2023: 3; 2024: 4; 2025: 6; 2026: 3.
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- 2025Graphs Meet AI Agents: Taxonomy, Progress, and Future Opportunitiescited by 23
- 2022Modularity-Aware Graph Autoencoders for Joint Community Detection and Link Predictioncited by 22
- 2022Directed Graph Auto-Encoderscited by 22
- 2022Explainability in Music Recommender Systemscited by 15
- 2021Cold Start Similar Artists Ranking with Gravity-Inspired Graph Autoencoderscited by 12
- 2022Sampling Enclosing Subgraphs for Link Predictioncited by 9
- 2021D-HYPR: Harnessing Neighborhood Modeling and Asymmetry Preservation for Digraph Representation Learningcited by 8
- 2023Origin-Destination Network Generation via Gravity-Guided GANcited by 8
- 2024DUPLEX: Dual GAT for Complex Embedding of Directed Graphscited by 7
- 2022Recommending Related Products Using Graph Neural Networks in Directed Graphscited by 6
- 2024Signed Graph Autoencoder for Explainable and Polarization-Aware Network Embeddingscited by 4
- 2021On Generalization of Graph Autoencoders with Adversarial Trainingcited by 3
16 more
- 2022New Frontiers in Graph Autoencoders: Joint Community Detection and Link Predictioncited by 1
- 2023Of Spiky SVDs and Music Recommendationcited by 1
- 2024A Generative Framework for Predictive Modeling of Multiple Chronic Conditions Using Graph Variational Autoencoder and Bandit-Optimized Graph Neural Networkcited by 1
- 2021A Deep Latent Space Model for Graph Representation Learningcited by 0
- 2022Learning Asymmetric Embedding for Attributed Networks via Convolutional Neural Networkcited by 0
- 2022Rethinking the positive role of cluster structure in complex networks for link prediction taskscited by 0
- 2023Concept Prerequisite Relation Prediction by Using Permutation-Equivariant Directed Graph Neural Networkscited by 0
- 2024Multi-Class and Multi-Task Strategies for Neural Directed Link Predictioncited by 0
- 2025Rethinking Link Prediction for Directed Graphscited by 0
- 2025Understanding the Design Principles of Link Prediction in Directed Settingscited by 0
- 2025To Share or Not to Share: Investigating Weight Sharing in Variational Graph Autoencoderscited by 0
- 2025Directed Link Prediction using GNN with Local and Global Feature Fusioncited by 0
- 2025SynCircuit: Automated Generation of New Synthetic RTL Circuits Can Enable Big Data in Circuitscited by 0
- 2026MGKAN: Predicting Asymmetric Drug-Drug Interactions via a Multimodal Graph Kolmogorov-Arnold Networkcited by 0
- 2026GravityGraphSAGE: Link Prediction in Directed Attributed Graphscited by 0
- 2026Code evolution for link prediction in complex networkscited by 0
- 2026Code evolution for link prediction in complex networks18 Jun 2026
- 2026GravityGraphSAGE: Link Prediction in Directed Attributed Graphs10 May 2026
- 2026MGKAN: Predicting Asymmetric Drug-Drug Interactions via a Multimodal Graph Kolmogorov-Arnold Network2 Feb 2026
- 2025SynCircuit: Automated Generation of New Synthetic RTL Circuits Can Enable Big Data in Circuits26 Aug 2025
- 2025Directed Link Prediction using GNN with Local and Global Feature Fusion25 Jun 2025
- 2025Graphs Meet AI Agents: Taxonomy, Progress, and Future Opportunities22 Jun 2025
- 2025To Share or Not to Share: Investigating Weight Sharing in Variational Graph Autoencoders23 Feb 2025
- 2025Understanding the Design Principles of Link Prediction in Directed Settings20 Feb 2025
- 2025Rethinking Link Prediction for Directed Graphs8 Feb 2025
- 2024Multi-Class and Multi-Task Strategies for Neural Directed Link Prediction14 Dec 2024
- 2024A Generative Framework for Predictive Modeling of Multiple Chronic Conditions Using Graph Variational Autoencoder and Bandit-Optimized Graph Neural Network20 Sep 2024
- 2024Signed Graph Autoencoder for Explainable and Polarization-Aware Network Embeddings16 Sep 2024
16 more
- 2024DUPLEX: Dual GAT for Complex Embedding of Directed Graphs8 Jun 2024
- 2023Concept Prerequisite Relation Prediction by Using Permutation-Equivariant Directed Graph Neural Networks15 Dec 2023
- 2023Of Spiky SVDs and Music Recommendation30 Jun 2023
- 2023Origin-Destination Network Generation via Gravity-Guided GAN6 Jun 2023
- 2022Recommending Related Products Using Graph Neural Networks in Directed Graphs18 Nov 2022
- 2022New Frontiers in Graph Autoencoders: Joint Community Detection and Link Prediction16 Nov 2022
- 2022Rethinking the positive role of cluster structure in complex networks for link prediction tasks4 Nov 2022
- 2022Sampling Enclosing Subgraphs for Link Prediction23 Jun 2022
- 2022Directed Graph Auto-Encoders25 Feb 2022
- 2022Learning Asymmetric Embedding for Attributed Networks via Convolutional Neural Network13 Feb 2022
- 2022Modularity-Aware Graph Autoencoders for Joint Community Detection and Link Prediction2 Feb 2022
- 2022Explainability in Music Recommender Systems25 Jan 2022
- 2021D-HYPR: Harnessing Neighborhood Modeling and Asymmetry Preservation for Digraph Representation Learning22 Dec 2021
- 2021Cold Start Similar Artists Ranking with Gravity-Inspired Graph Autoencoders2 Aug 2021
- 2021On Generalization of Graph Autoencoders with Adversarial Training6 Jul 2021
- 2021A Deep Latent Space Model for Graph Representation Learning22 Jun 2021
- 2022Modularity-Aware Graph Autoencoders for Joint Community Detection and Link Predictioncited by 22
- 2022Directed Graph Auto-Encoderscited by 22
- 2022Explainability in Music Recommender Systemscited by 15
- 2021Cold Start Similar Artists Ranking with Gravity-Inspired Graph Autoencoderscited by 12
- 2022Sampling Enclosing Subgraphs for Link Predictioncited by 9
- 2021D-HYPR: Harnessing Neighborhood Modeling and Asymmetry Preservation for Digraph Representation Learningcited by 8
- 2023Origin-Destination Network Generation via Gravity-Guided GANcited by 8
- 2024DUPLEX: Dual GAT for Complex Embedding of Directed Graphscited by 7
- 2022Recommending Related Products Using Graph Neural Networks in Directed Graphscited by 6
- 2024Signed Graph Autoencoder for Explainable and Polarization-Aware Network Embeddingscited by 4
- 2021On Generalization of Graph Autoencoders with Adversarial Trainingcited by 3
- 2022New Frontiers in Graph Autoencoders: Joint Community Detection and Link Predictioncited by 1
12 most cited of 27 All 27 (JSON)
- 2026Code evolution for link prediction in complex networks18 Jun 2026
- 2026GravityGraphSAGE: Link Prediction in Directed Attributed Graphs10 May 2026
- 2026MGKAN: Predicting Asymmetric Drug-Drug Interactions via a Multimodal Graph Kolmogorov-Arnold Network2 Feb 2026
- 2025SynCircuit: Automated Generation of New Synthetic RTL Circuits Can Enable Big Data in Circuits26 Aug 2025
- 2025Directed Link Prediction using GNN with Local and Global Feature Fusion25 Jun 2025
- 2025To Share or Not to Share: Investigating Weight Sharing in Variational Graph Autoencoders23 Feb 2025
- 2025Understanding the Design Principles of Link Prediction in Directed Settings20 Feb 2025
- 2025Rethinking Link Prediction for Directed Graphs8 Feb 2025
- 2024Multi-Class and Multi-Task Strategies for Neural Directed Link Prediction14 Dec 2024
- 2024A Generative Framework for Predictive Modeling of Multiple Chronic Conditions Using Graph Variational Autoencoder and Bandit-Optimized Graph Neural Network20 Sep 2024
- 2024Signed Graph Autoencoder for Explainable and Polarization-Aware Network Embeddings16 Sep 2024
- 2024DUPLEX: Dual GAT for Complex Embedding of Directed Graphs8 Jun 2024
12 newest of 27 All 27 (JSON)