Causal DAG Identification for Count Data via Poisson Thinning Structural Equation Models

Count-valued variables arise in many scientific and applied settings, yet explicit structural models that allow full identification of causal DAGs from observational data remain limited. The Poisson branching structural causal model (PB-SCM) provides a count-valued analogue of linear structural equation models using binomial thinning and independent Poisson exogenous variables, but its causal DAG is generally only partially identifiable. Building on this framework, we propose the Poisson thinning structural equation model (PT-SEM), which replaces binomial thinning in PB-SCM with Poisson thinning and allows node-wise exogenous distributions from diverse count-distribution families. Under node-wise regularity conditions, we establish identifiability of the causal DAG, the thinning coefficients, and the node-wise exogenous distributions. The same identification analysis extends to binomial thinning, yielding full identifiability whenever every nonsink has non-Poisson exogenous noise. We further develop a structure learning algorithm that optimizes, via dynamic programming, a BIC score based on local likelihoods evaluated at plug-in moment estimates, and establish its consistency for DAG selection. Simulations demonstrate favorable performance in DAG recovery and thinning-coefficient estimation, and a real-data application illustrates the practical utility of PT-SEM.