VEELA: A Clinically-Constrained Benchmark for Liver Vessel Segmentation in Computed Tomography Angiography
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Abstract (arXiv)
Accurate segmentation of hepatic and portal vessels in contrast-enhanced computed tomography angiography (CTA) remains challenging due to complex vascular topology, peripheral visibility limitations, and acquisition-induced ambiguities. While existing public datasets offer valuable benchmarks, few include clinically realistic annotation constraints. We introduce VEELA (Vessel Extraction and Extrication for Liver Analysis), a rigorously curated liver vessel dataset derived from 40 CTA scans inherited from the CHAOS grand-challenge cohort. All vessels were manually delineated slice-by-slice under multi-expert consensus, using a strict visibility-driven annotation policy and avoiding anatomically inferred interpolation. This design explicitly captures anatomical variability and imaging-related uncertainty. As a continuation of the CHAOS challenge, VEELA enables reproducible cross-benchmark evaluation while extending the scope to fine-grained hepatic and portal vessel segmentation. We further establish a standardized benchmarking framework and analyze complementary evaluation metrics, including topology-aware (clDice), overlap-based (IoU), boundary-sensitive (NSD), and geometry-aware (area, length) measures. Our results demonstrate that different metrics capture distinct aspects of vascular integrity, underscoring the necessity of multi-perspective evaluation for clinically meaningful vessel segmentation. VEELA is publicly released to facilitate reproducible research and support the development of robust vascular segmentation methods. Researchers can access the evaluation metrics, dataset, and submission platform at https://www.synapse.org/Synapse:syn65471967.
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References · 11
- 2021Swin Transformer: Hierarchical Vision Transformer using Shifted Windowscited by 12,139
- 20163D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotationcited by 1,476
- 2022Swin UNETR: Swin Transformers for Semantic Segmentation of Brain Tumors in MRI Imagescited by 830
- 2021The Medical Segmentation Decathloncited by 628
- 2020CHAOS Challenge -- Combined (CT-MR) Healthy Abdominal Organ Segmentationcited by 309
- 2020clDice -- A Novel Topology-Preserving Loss Function for Tubular Structure Segmentationcited by 294
- 2021Hepatic vessel segmentation based on 3D swin-transformer with inductive biased multi-head self-attentioncited by 8
- 20233D Vessel Segmentation with Limited Guidance of 2D Structure-agnostic Vessel Annotationscited by 5
- 2024Deep vessel segmentation based on a new combination of vesselness filterscited by 5
- 2024Attention-Enhanced Hybrid Feature Aggregation Network for 3D Brain Tumor Segmentationcited by 1
- 2024GLIMS: Attention-Guided Lightweight Multi-Scale Hybrid Network for Volumetric Semantic Segmentationcited by 1
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