ProbeLogits: Kernel-Level LLM Inference Primitives for AI-Native Operating Systems

An OS kernel that runs LLM inference internally can read the model's own next-token logit distribution before any text is generated, and act on it as a governance primitive. I present ProbeLogits, a kernel-level operation that performs a single forward pass and reads specific token logits to classify an agent's action as safe or dangerous, with zero learned parameters. Because the probe reads a logit from the same base model the agent already runs, it removes the second model a fine-tuned guard requires: the marginal cost of a safety check becomes a single logit read. I evaluate ProbeLogits on three base models (Qwen2.5-7B, Llama-3-8B, Mistral-7B) across three external benchmarks (HarmBench, XSTest, ToxicChat). On HarmBench non-copyright, all three reach a 97-99% block rate. On ToxicChat (n=1,000), ProbeLogits attains F1 parity-or-better against Llama Guard 3: Qwen2.5-7B Safe/Dangerous reaches F1=0.812 (+13.7 pp, bootstrap 95% CIs disjoint), Llama-3 matches within CI (+0.4 pp), and Mistral exceeds by +4.4 pp. Classification is a measured 2.4-3.4x faster than Llama Guard 3 (332-556 ms vs. 851-1,142 ms), because it reads a single logit position instead of generating tokens. A calibration strength alpha acts as a deployment-time policy knob rather than a learned hyperparameter, trading recall for precision per operation class. I implement ProbeLogits within Anima OS, a bare-metal x86-64 kernel written in ~285,000 lines of Rust. Because agent actions must pass through kernel-mediated host functions, enforcement operates below the WASM sandbox boundary, making it substantially harder to circumvent than application-layer classifiers.