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Bridging Modalities: Joint Synthesis and Registration Framework for Aligning Diffusion MRI with T1-Weighted Images

arXiv 2601.11689 ↗First posted 16 Jan 2026eess.IV cs.CVcited by 0

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Abstract (arXiv)

Multimodal image registration between diffusion MRI (dMRI) and T1-weighted (T1w) MRI images is a critical step for aligning diffusion-weighted imaging (DWI) data with structural anatomical space. Traditional registration methods often struggle to ensure accuracy due to the large intensity differences between diffusion data and high-resolution anatomical structures. This paper proposes an unsupervised registration framework based on a generative registration network, which transforms the original multimodal registration problem between b0 and T1w images into a unimodal registration task between a generated image and the real T1w image. This effectively reduces the complexity of cross-modal registration. The framework first employs an image synthesis model to generate images with T1w-like contrast, and then learns a deformation field from the generated image to the fixed T1w image. The registration network jointly optimizes local structural similarity and cross-modal statistical dependency to improve deformation estimation accuracy. Experiments conducted on two independent datasets demonstrate that the proposed method outperforms several state-of-the-art approaches in multimodal registration tasks.

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References · 11

  1. 2015Spatial Transformer Networkscited by 1,423
  2. 2018VoxelMorph: A Learning Framework for Deformable Medical Image Registrationcited by 657
  3. 2018Deep Visual Domain Adaptation: A Surveycited by 634
  4. 2018A Deep Learning Framework for Unsupervised Affine and Deformable Image Registrationcited by 160
  5. 2020SynthMorph: learning contrast-invariant registration without acquired imagescited by 137
  6. 2019Deep Learning in Medical Image Registration: A Surveycited by 124
  7. 2020CycleMorph: Cycle Consistent Unsupervised Deformable Image Registrationcited by 78
  8. 2023A survey on deep learning in medical image registration: new technologies, uncertainty, evaluation metrics, and beyondcited by 55
  9. 2020CoMIR: Contrastive Multimodal Image Representation for Registrationcited by 45
  10. 2023Brain-ID: Learning Contrast-agnostic Anatomical Representations for Brain Imagingcited by 10
  11. 2022ContraReg: Contrastive Learning of Multi-modality Unsupervised Deformable Image Registrationcited by 9

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