mlsanityData to 7 Oct 2026

CelloAI: Leveraging Large Language Models for HPC Software Development in High Energy Physics

arXiv 2508.16713 ↗First posted 22 Aug 2025cs.SE cs.AI hep-excited by 2

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Abstract (arXiv)

Next-generation High Energy Physics (HEP) experiments will generate unprecedented data volumes, necessitating High Performance Computing (HPC) integration alongside traditional high-throughput computing. However, HPC adoption in HEP is hindered by the challenge of porting legacy software to heterogeneous architectures and the sparse documentation of these complex scientific codebases. We present CelloAI, a locally hosted coding assistant that leverages Large Language Models (LLMs) with retrieval-augmented generation (RAG) to support HEP code documentation and generation. This local deployment ensures data privacy, eliminates recurring costs and provides access to large context windows without external dependencies. CelloAI addresses two primary use cases, code documentation and code generation, through specialized components. For code documentation, the assistant provides: (a) Doxygen style comment generation for all functions and classes by retrieving relevant information from RAG sources (papers, posters, presentations), (b) file-level summary generation, and (c) an interactive chatbot for code comprehension queries. For code generation, CelloAI employs syntax-aware chunking strategies that preserve syntactic boundaries during embedding, improving retrieval accuracy in large codebases. The system integrates callgraph knowledge to maintain dependency awareness during code modifications and provides AI-generated suggestions for performance optimization and accurate refactoring. We evaluate CelloAI using real-world HEP applications from ATLAS, CMS, and DUNE experiments, comparing different embedding models for code retrieval effectiveness. Our results demonstrate the AI assistant's capability to enhance code understanding and support reliable code generation while maintaining the transparency and safety requirements essential for scientific computing environments.

Key facts. Cited by 2 papers in the map (data through 7 Oct 2026). Builds on 17 of its 35 references that are in the map. First posted on arXiv 22 Aug 2025.

Builds on

17 of 35 references.

References · 17

  1. 2021Evaluating Large Language Models Trained on Codecited by 8,053
  2. 2023Code Llama: Open Foundation Models for Codecited by 2,105
  3. 2022Competition-Level Code Generation with AlphaCodecited by 1,427
  4. 2023StarCoder: may the source be with you!cited by 790
  5. 2024Large Language Models: A Surveycited by 506
  6. 2025LLMs Get Lost In Multi-Turn Conversationcited by 400
  7. 2023A Survey on Large Language Model (LLM) Security and Privacy: The Good, the Bad, and the Uglycited by 380
  8. 2025Paper2Code: Automating Code Generation from Scientific Papers in Machine Learningcited by 67
  9. 2024Financial Report Chunking for Effective Retrieval Augmented Generationcited by 46
  10. 2023On the Effectiveness of Large Language Models in Domain-Specific Code Generationcited by 44
  11. 2023Evaluation of OpenAI Codex for HPC Parallel Programming Models Kernel Generationcited by 22
  12. 2025HiPerRAG: High-Performance Retrieval Augmented Generation for Scientific Insightscited by 11
5 more
  1. 2024LASSI: An LLM-based Automated Self-Correcting Pipeline for Translating Parallel Scientific Codescited by 10
  2. 2023Domain-specific ChatBots for Science using Embeddingscited by 4
  3. 2023Portable Programming Model Exploration for LArTPC Simulation in a Heterogeneous Computing Environment: OpenMP vs. SYCLcited by 1
  4. 2023Evaluating Portable Parallelization Strategies for Heterogeneous Architectures in High Energy Physicscited by 1
  5. 2025Packaging HEP Heterogeneous Mini-apps for Portable Benchmarking and Facility Evaluation on Modern HPCscited by 1

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2026: 2.

2 papers.

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  1. 2026Reliable LLM-Generated Programs for High-Energy Physics Experiments through Graph-Grounded Software Knowledge ↗
  2. 2026AstraAI: LLMs, Retrieval, and AST-Guided Assistance for HPC Codebases
  3. 2026HepScript: A Dual-Use DSL for Human-AI Collaborative Data Analysis Workflows in High-Energy Physics
  4. 2024LLM as HPC Expert: Extending RAG Architecture for HPC Data
  5. 2026Retrieval-Augmented Generation for Scientific Code Understanding
  6. 2025Automating High Energy Physics Data Analysis with LLM-Powered Agents
  7. 2026Exploring the Role of LLMs in HPC Programming: A Survey
  8. 2025Chain of Unit-Physics: A Primitive-Centric Approach to Scientific Code Synthesis