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From EMR Data to Clinical Insight: An LLM-Driven Framework for Automated Pre-Consultation Questionnaire Generation

arXiv 2508.00581 ↗First posted 1 Aug 2025cs.AIcited by 1

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Abstract (arXiv)

Pre-consultation is a critical component of effective healthcare delivery. However, generating comprehensive pre-consultation questionnaires from complex, voluminous Electronic Medical Records (EMRs) is a challenging task. Direct Large Language Model (LLM) approaches face difficulties in this task, particularly regarding information completeness, logical order, and disease-level synthesis. To address this issue, we propose a novel multi-stage LLM-driven framework: Stage 1 extracts atomic assertions (key facts with timing) from EMRs; Stage 2 constructs personal causal networks and synthesizes disease knowledge by clustering representative networks from an EMR corpus; Stage 3 generates tailored personal and standardized disease-specific questionnaires based on these structured representations. This framework overcomes limitations of direct methods by building explicit clinical knowledge. Evaluated on a real-world EMR dataset and validated by clinical experts, our method demonstrates superior performance in information coverage, diagnostic relevance, understandability, and generation time, highlighting its practical potential to enhance patient information collection.

Key facts. Cited by 1 paper in the map (data through 14 Oct 2026). Builds on 7 of its 36 references that are in the map. First posted on arXiv 1 Aug 2025.

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7 of 36 references.

References · 7

  1. 2019BioBERT: a pre-trained biomedical language representation model for biomedical text miningcited by 1,947
  2. 2019ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmissioncited by 493
  3. 2022Can large language models reason about medical questions?cited by 194
  4. 2021Machine learning based disease diagnosis: A comprehensive reviewcited by 30
  5. 2020Knowledge Graph-based Question Answering with Electronic Health Recordscited by 19
  6. 2023Transformers and Large Language Models for Chemistry and Drug Discoverycited by 13
  7. 2024UniOQA: A Unified Framework for Knowledge Graph Question Answering with Large Language Modelscited by 5

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