ContextMRI: Enhancing Compressed Sensing MRI through Metadata Conditioning
On the map: Diffusion models → Medical imaging and segmentation
Abstract (arXiv)
Compressed sensing MRI seeks to accelerate MRI acquisition processes by sampling fewer k-space measurements and then reconstructing the missing data algorithmically. The success of these approaches often relies on strong priors or learned statistical models. While recent diffusion model-based priors have shown great potential, previous methods typically ignore clinically available metadata (e.g. patient demographics, imaging parameters, slice-specific information). In practice, metadata contains meaningful cues about the anatomy and acquisition protocol, suggesting it could further constrain the reconstruction problem. In this work, we propose ContextMRI, a text-conditioned diffusion model for MRI that integrates granular metadata into the reconstruction process. We train a pixel-space diffusion model directly on minimally processed, complex-valued MRI images. During inference, metadata is converted into a structured text prompt and fed to the model via CLIP text embeddings. By conditioning the prior on metadata, we unlock more accurate reconstructions and show consistent gains across multiple datasets, acceleration factors, and undersampling patterns. Our experiments demonstrate that increasing the fidelity of metadata, ranging from slice location and contrast to patient age, sex, and pathology, systematically boosts reconstruction performance. This work highlights the untapped potential of leveraging clinical context for inverse problems and opens a new direction for metadata-driven MRI reconstruction.
Key facts. Cited by 8 papers in the map (data through 7 Oct 2026). Placed in Medical imaging and segmentation, one of 14 directions in Diffusion models. First posted on arXiv 8 Jan 2025.
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Citing papers per year: 2025: 7; 2026: 1.
8 papers.
- 2025Diffusion models for inverse problemscited by 15
- 2025MR-CLIP: Efficient Metadata-Guided Learning of MRI Contrast Representationscited by 4
- 2025Metadata-Aligned 3D MRI Representations for Contrast Understanding and Quality Controlcited by 3
- 2025Diffusion Probabilistic Generative Models for Accelerated, in-NICU Permanent Magnet Neonatal MRIcited by 1
- 2025Inference-Time Search Using Side Information for Diffusion-Based Image Reconstructioncited by 1
- 2025Clinical Metadata Guided Limited-Angle CT Image Reconstructioncited by 0
- 2025Predicting before Reconstruction: A generative prior framework for MRI accelerationcited by 0
- 2026Active Learning for Conditional Generative Compressed Sensingcited by 0
- 2026Active Learning for Conditional Generative Compressed Sensing6 May 2026
- 2025Metadata-Aligned 3D MRI Representations for Contrast Understanding and Quality Control1 Nov 2025
- 2025Predicting before Reconstruction: A generative prior framework for MRI acceleration22 Oct 2025
- 2025Inference-Time Search Using Side Information for Diffusion-Based Image Reconstruction2 Oct 2025
- 2025Clinical Metadata Guided Limited-Angle CT Image Reconstruction1 Sep 2025
- 2025Diffusion models for inverse problems4 Aug 2025
- 2025MR-CLIP: Efficient Metadata-Guided Learning of MRI Contrast Representations23 Jun 2025
- 2025Diffusion Probabilistic Generative Models for Accelerated, in-NICU Permanent Magnet Neonatal MRI21 May 2025
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