Converting Time Series Data to Numeric Representations Using Alphabetic Mapping and k-mer strategy
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Abstract (arXiv)
In the realm of data analysis and bioinformatics, representing time series data in a manner akin to biological sequences offers a novel approach to leverage sequence analysis techniques. Transforming time series signals into molecular sequence-type representations allows us to enhance pattern recognition by applying sophisticated sequence analysis techniques (e.g. k-mers based representation) developed in bioinformatics, uncovering hidden patterns and relationships in complex, non-linear time series data. This paper proposes a method to transform time series signals into biological/molecular sequence-type representations using a unique alphabetic mapping technique. By generating 26 ranges corresponding to the 26 letters of the English alphabet, each value within the time series is mapped to a specific character based on its range. This conversion facilitates the application of sequence analysis algorithms, typically used in bioinformatics, to analyze time series data. We demonstrate the effectiveness of this approach by converting real-world time series signals into character sequences and performing sequence classification. The resulting sequences can be utilized for various sequence-based analysis techniques, offering a new perspective on time series data representation and analysis.
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References · 9
- 2018Deep learning for time series classification: a reviewcited by 575
- 2020A Transformer-based Framework for Multivariate Time Series Representation Learningcited by 450
- 2019InceptionTime: Finding AlexNet for Time Series Classificationcited by 387
- 2021Spike2Vec: An Efficient and Scalable Embedding Approach for COVID-19 Spike Sequencescited by 30
- 2021A k-mer Based Approach for SARS-CoV-2 Variant Identificationcited by 23
- 2022Sequencer: Deep LSTM for Image Classificationcited by 23
- 2022Efficient Approximate Kernel Based Spike Sequence Classificationcited by 18
- 2023Parallel Two-Stage Approach for Joint Symbolic Approximation of Time Seriescited by 3
- 2022Information We Can Extract About a User From 'One Minute Mobile Application Usage'cited by 1
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