SynEHRgy: Synthesizing Mixed-Type Structured Electronic Health Records using Decoder-Only Transformers
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Abstract (arXiv)
Generating synthetic Electronic Health Records (EHRs) offers significant potential for data augmentation, privacy-preserving data sharing, and improving machine learning model training. We propose a novel tokenization strategy tailored for structured EHR data, which encompasses diverse data types such as covariates, ICD codes, and irregularly sampled time series. Using a GPT-like decoder-only transformer model, we demonstrate the generation of high-quality synthetic EHRs. Our approach is evaluated using the MIMIC-III dataset, and we benchmark the fidelity, utility, and privacy of the generated data against state-of-the-art models.
Key facts. Cited by 5 papers in the map (data through 7 Oct 2026). Builds on 31 of its 47 references that are in the map. First posted on arXiv 20 Nov 2024.
Builds on
31 of 47 references.
References · 31
- 2022Large Language Models Encode Clinical Knowledgecited by 1,807
- 2024Chronos: Learning the Language of Time Seriescited by 712
- 2020The Future of Digital Health with Federated Learningcited by 625
- 2024Unified Training of Universal Time Series Forecasting Transformerscited by 588
- 2019ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmissioncited by 487
- 2020Reliable Fidelity and Diversity Metrics for Generative Modelscited by 425
- 2023Towards Expert-Level Medical Question Answering with Large Language Modelscited by 382
- 2017Real-valued (Medical) Time Series Generation with Recurrent Conditional GANscited by 329
- 2022Language Models are Realistic Tabular Data Generatorscited by 290
- 2017Multitask learning and benchmarking with clinical time series datacited by 287
- 2023MEDITRON-70B: Scaling Medical Pretraining for Large Language Modelscited by 272
- 2019BEHRT: Transformer for Electronic Health Recordscited by 258
19 more
- 2024Timer: Generative Pre-trained Transformers Are Large Time Series Modelscited by 198
- 2017Generating Multi-label Discrete Patient Records using Generative Adversarial Networkscited by 197
- 2024Diffusion-TS: Interpretable Diffusion for General Time Series Generationcited by 179
- 2022LIFT: Language-Interfaced Fine-Tuning for Non-Language Machine Learning Taskscited by 146
- 2018A Review of Challenges and Opportunities in Machine Learning for Healthcited by 67
- 2021Generating Synthetic Mixed-type Longitudinal Electronic Health Records for Artificial Intelligent Applicationscited by 47
- 2020CorGAN: Correlation-Capturing Convolutional Generative Adversarial Networks for Generating Synthetic Healthcare Recordscited by 37
- 2020EVA: Generating Longitudinal Electronic Health Records Using Conditional Variational Autoencoderscited by 28
- 2021Towards Generating Real-World Time Series Datacited by 26
- 2022PromptEHR: Conditional Electronic Healthcare Records Generation with Prompt Learningcited by 22
- 2023MedDiff: Generating Electronic Health Records using Accelerated Denoising Diffusion Modelcited by 22
- 2024CEHR-GPT: Generating Electronic Health Records with Chronological Patient Timelinescited by 22
- 2023EHRDiff: Exploring Realistic EHR Synthesis with Diffusion Modelscited by 18
- 2023Synthesizing Mixed-type Electronic Health Records using Diffusion Modelscited by 17
- 2022Multi-Label Clinical Time-Series Generation via Conditional GANcited by 16
- 2024TimeLDM: Latent Diffusion Model for Unconditional Time Series Generationcited by 10
- 2024TimEHR: Image-based Time Series Generation for Electronic Health Recordscited by 8
- 2024Synthesizing Multimodal Electronic Health Records via Predictive Diffusion Modelscited by 7
- 2023TS-Diffusion: Generating Highly Complex Time Series with Diffusion Modelscited by 6
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Citing papers per year: 2025: 3; 2026: 2.
5 papers.
- 2025TabularARGN: A Flexible and Efficient Auto-Regressive Framework for Generating High-Fidelity Synthetic Datacited by 13
- 2026SynthAgent: A Multi-Agent LLM Framework for Realistic Patient Simulation -- A Case Study in Obesity with Mental Health Comorbiditiescited by 2
- 2025Critical Challenges and Guidelines in Evaluating Synthetic Tabular Data: A Systematic Reviewcited by 0
- 2025Privacy-Preserving Tabular Synthetic Data Generation Using TabularARGNcited by 0
- 2026AdaPCLA: Adaptive Prior-Calibrated Logit Adjustment for Long-Tailed Longitudinal EHR Generationcited by 0
- 2026AdaPCLA: Adaptive Prior-Calibrated Logit Adjustment for Long-Tailed Longitudinal EHR Generation14 Jul 2026
- 2026SynthAgent: A Multi-Agent LLM Framework for Realistic Patient Simulation -- A Case Study in Obesity with Mental Health Comorbidities9 Feb 2026
- 2025Privacy-Preserving Tabular Synthetic Data Generation Using TabularARGN8 Aug 2025
- 2025Critical Challenges and Guidelines in Evaluating Synthetic Tabular Data: A Systematic Review10 Apr 2025
- 2025TabularARGN: A Flexible and Efficient Auto-Regressive Framework for Generating High-Fidelity Synthetic Data21 Jan 2025