mlsanityData to 14 Oct 2026

MedINST: Meta Dataset of Biomedical Instructions

arXiv 2410.13458 ↗First posted 17 Oct 2024cs.CLcited by 7

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Abstract (arXiv)

The integration of large language model (LLM) techniques in the field of medical analysis has brought about significant advancements, yet the scarcity of large, diverse, and well-annotated datasets remains a major challenge. Medical data and tasks, which vary in format, size, and other parameters, require extensive preprocessing and standardization for effective use in training LLMs. To address these challenges, we introduce MedINST, the Meta Dataset of Biomedical Instructions, a novel multi-domain, multi-task instructional meta-dataset. MedINST comprises 133 biomedical NLP tasks and over 7 million training samples, making it the most comprehensive biomedical instruction dataset to date. Using MedINST as the meta dataset, we curate MedINST32, a challenging benchmark with different task difficulties aiming to evaluate LLMs' generalization ability. We fine-tune several LLMs on MedINST and evaluate on MedINST32, showcasing enhanced cross-task generalization.

Key facts. Cited by 7 papers in the map (data through 14 Oct 2026). Builds on 32 of its 61 references that are in the map. First posted on arXiv 17 Oct 2024.

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32 of 61 references.

References · 32

  1. 2020Language Models are Few-Shot Learnerscited by 32,419
  2. 2022Training language models to follow instructions with human feedbackcited by 15,971
  3. 2023LLaMA: Open and Efficient Foundation Language Modelscited by 14,132
  4. 2020Measuring Massive Multitask Language Understandingcited by 7,963
  5. 2021Finetuned Language Models Are Zero-Shot Learnerscited by 3,780
  6. 2022Self-Instruct: Aligning Language Models with Self-Generated Instructionscited by 2,724
  7. 2021Pre-train, Prompt, and Predict: A Systematic Survey of Prompting Methods in Natural Language Processingcited by 2,234
  8. 2019BioBERT: a pre-trained biomedical language representation model for biomedical text miningcited by 1,947
  9. 2018FEVER: a large-scale dataset for Fact Extraction and VERificationcited by 1,375
  10. 2020Domain-Specific Language Model Pretraining for Biomedical Natural Language Processingcited by 1,009
  11. 2022Super-NaturalInstructions: Generalization via Declarative Instructions on 1600+ NLP Taskscited by 868
  12. 2023The Flan Collection: Designing Data and Methods for Effective Instruction Tuningcited by 739
20 more
  1. 2020Fact or Fiction: Verifying Scientific Claimscited by 554
  2. 2023ChatDoctor: A Medical Chat Model Fine-Tuned on a Large Language Model Meta-AI (LLaMA) Using Medical Domain Knowledgecited by 325
  3. 2024BioMistral: A Collection of Open-Source Pretrained Large Language Models for Medical Domainscited by 301
  4. 2019Transfer Learning in Biomedical Natural Language Processing: An Evaluation of BERT and ELMo on Ten Benchmarking Datasetscited by 299
  5. 2023MedAlpaca -- An Open-Source Collection of Medical Conversational AI Models and Training Datacited by 286
  6. 2020Explainable Automated Fact-Checking for Public Health Claimscited by 211
  7. 2022Large Language Models are Few-Shot Clinical Information Extractorscited by 207
  8. 2020MedDialog: Two Large-scale Medical Dialogue Datasetscited by 161
  9. 2019Structural Scaffolds for Citation Intent Classification in Scientific Publicationscited by 130
  10. 2021SciFive: a text-to-text transformer model for biomedical literaturecited by 99
  11. 2020Multi-XScience: A Large-scale Dataset for Extreme Multi-document Summarization of Scientific Articlescited by 97
  12. 2023AlpaCare:Instruction-tuned Large Language Models for Medical Applicationcited by 90
  13. 2023PMC-LLaMA: Towards Building Open-source Language Models for Medicinecited by 88
  14. 2021Pre-trained Language Models in Biomedical Domain: A Systematic Surveycited by 87
  15. 2019MedMentions: A Large Biomedical Corpus Annotated with UMLS Conceptscited by 80
  16. 2020Effective Transfer Learning for Identifying Similar Questions: Matching User Questions to COVID-19 FAQscited by 48
  17. 2019Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilationcited by 30
  18. 2020MeDAL: Medical Abbreviation Disambiguation Dataset for Natural Language Understanding Pretrainingcited by 18
  19. 2022Multi-label classification for biomedical literature: an overview of the BioCreative VII LitCovid Track for COVID-19 literature topic annotationscited by 14
  20. 2019A Large Parallel Corpus of Full-Text Scientific Articlescited by 12

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Cited by year (2026 to 14 Oct)

Citing papers per year: 2025: 3; 2026: 4.

7 papers.