Regression with Large Language Models for Materials and Molecular Property Prediction
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Abstract (arXiv)
We demonstrate the ability of large language models (LLMs) to perform material and molecular property regression tasks, a significant deviation from the conventional LLM use case. We benchmark the Large Language Model Meta AI (LLaMA) 3 on several molecular properties in the QM9 dataset and 28 materials properties. Only composition-based input strings are used as the model input and we fine tune on only the generative loss. We broadly find that LLaMA 3, when fine-tuned using the SMILES representation of molecules, provides useful regression results which can rival standard materials property prediction models like random forest or fully connected neural networks on the QM9 dataset. Not surprisingly, LLaMA 3 errors are 5-10x higher than those of the state-of-the-art models that were trained using far more granular representation of molecules (e.g., atom types and their coordinates) for the same task. Similarly, LLaMA 3 provides comparable, although slightly worse, accuracy relative to random forest and elemental descriptors when using just compound chemical description on our set of 28 materials properties. Interestingly, LLaMA 3 provides improved predictions compared to GPT-3.5 and GPT-4o. This work highlights the versatility of LLMs, suggesting that LLM-like generative models can potentially transcend their traditional applications to tackle complex physical phenomena, thus paving the way for future research and applications in chemistry, materials science and other scientific domains.
Key facts. Cited by 11 papers in the map (data through 14 Oct 2026). Builds on 14 of its 49 references that are in the map. First posted on arXiv 9 Sep 2024.
Builds on
14 of 49 references.
References · 14
- 2021Large-Scale Chemical Language Representations Capture Molecular Structure and Propertiescited by 206
- 2022Translation between Molecules and Natural Languagecited by 177
- 2024LlaSMol: Advancing Large Language Models for Chemistry with a Large-Scale, Comprehensive, High-Quality Instruction Tuning Datasetcited by 128
- 2022ChemBERTa-2: Towards Chemical Foundation Modelscited by 127
- 2023Extracting Accurate Materials Data from Research Papers with Conversational Language Models and Prompt Engineeringcited by 86
- 2023InstructMol: Multi-Modal Integration for Building a Versatile and Reliable Molecular Assistant in Drug Discoverycited by 86
- 2019Predicting materials properties without crystal structure: Deep representation learning from stoichiometrycited by 62
- 2024BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuningcited by 54
- 2017Machine learning modeling of superconducting critical temperaturecited by 32
- 2023ReLM: Leveraging Language Models for Enhanced Chemical Reaction Predictioncited by 24
- 2022BARTSmiles: Generative Masked Language Models for Molecular Representationscited by 18
- 2024Multimodal Language and Graph Learning of Adsorption Configuration in Catalysiscited by 15
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Citing papers per year: 2024: 1; 2025: 6; 2026: 4.
11 papers.
- 202534 Examples of LLM Applications in Materials Science and Chemistry: Towards Automation, Assistants, Agents, and Accelerated Scientific Discoverycited by 9
- 2024Reflections from the 2024 Large Language Model (LLM) Hackathon for Applications in Materials Science and Chemistrycited by 8
- 2025BOOM: Benchmarking Out-Of-distribution Molecular Property Predictions of Machine Learning Modelscited by 3
- 2026SiPhy: Single-Image Physical Property Reasoningcited by 2
- 2025Distilling and exploiting quantitative insights from Large Language Models for enhanced Bayesian optimization of chemical reactionscited by 1
- 2025Text to Band Gap: Pre-trained Language Models as Encoders for Semiconductor Band Gap Predictioncited by 0
- 2025Post Hoc Regression Refinement via Pairwise Rankingscited by 0
- 2025Element2Vec: Build Chemical Element Representation from Text for Property Predictioncited by 0
- 2026Rethinking Molecular Text Representations for LLMs: An Empirical Studycited by 0
- 2026From Critic to Confidence: PPO for Language-Based Quantitative Prediction with Confidence Estimationcited by 0
- 2026LLM-to-Flow Distillation: Teaching Natural Language Goals to Scientific Generatorscited by 0
- 2026LLM-to-Flow Distillation: Teaching Natural Language Goals to Scientific Generators12 Oct 2026
- 2026SiPhy: Single-Image Physical Property Reasoning24 Jul 2026
- 2026From Critic to Confidence: PPO for Language-Based Quantitative Prediction with Confidence Estimation14 Jul 2026
- 2026Rethinking Molecular Text Representations for LLMs: An Empirical Study2 Jun 2026
- 2025Element2Vec: Build Chemical Element Representation from Text for Property Prediction15 Oct 2025
- 2025Post Hoc Regression Refinement via Pairwise Rankings22 Aug 2025
- 202534 Examples of LLM Applications in Materials Science and Chemistry: Towards Automation, Assistants, Agents, and Accelerated Scientific Discovery5 May 2025
- 2025BOOM: Benchmarking Out-Of-distribution Molecular Property Predictions of Machine Learning Models3 May 2025
- 2025Distilling and exploiting quantitative insights from Large Language Models for enhanced Bayesian optimization of chemical reactions11 Apr 2025
- 2025Text to Band Gap: Pre-trained Language Models as Encoders for Semiconductor Band Gap Prediction7 Jan 2025
- 2024Reflections from the 2024 Large Language Model (LLM) Hackathon for Applications in Materials Science and Chemistry20 Nov 2024