Optimizing Long-tailed Link Prediction in Graph Neural Networks through Structure Representation Enhancement
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Abstract (arXiv)
Link prediction, as a fundamental task for graph neural networks (GNNs), has boasted significant progress in varied domains. Its success is typically influenced by the expressive power of node representation, but recent developments reveal the inferior performance of low-degree nodes owing to their sparse neighbor connections, known as the degree-based long-tailed problem. Will the degree-based long-tailed distribution similarly constrain the efficacy of GNNs on link prediction? Unexpectedly, our study reveals that only a mild correlation exists between node degree and predictive accuracy, and more importantly, the number of common neighbors between node pairs exhibits a strong correlation with accuracy. Considering node pairs with less common neighbors, i.e., tail node pairs, make up a substantial fraction of the dataset but achieve worse performance, we propose that link prediction also faces the long-tailed problem. Therefore, link prediction of GNNs is greatly hindered by the tail node pairs. After knowing the weakness of link prediction, a natural question is how can we eliminate the negative effects of the skewed long-tailed distribution on common neighbors so as to improve the performance of link prediction? Towards this end, we introduce our long-tailed framework (LTLP), which is designed to enhance the performance of tail node pairs on link prediction by increasing common neighbors. Two key modules in LTLP respectively supplement high-quality edges for tail node pairs and enforce representational alignment between head and tail node pairs within the same category, thereby improving the performance of tail node pairs.
Key facts. Cited by 9 papers in the map (data through 7 Oct 2026). Builds on 19 of its 42 references that are in the map. First posted on arXiv 30 Jul 2024.
Builds on
19 of 42 references.
References · 19
- 2017Inductive Representation Learning on Large Graphscited by 6,284
- 2018How Powerful are Graph Neural Networks?cited by 4,355
- 2019A Comprehensive Survey on Graph Neural Networkscited by 2,906
- 2017What Uncertainties Do We Need in Bayesian Deep Learning for Computer Vision?cited by 2,335
- 2020Open Graph Benchmark: Datasets for Machine Learning on Graphscited by 2,148
- 2016Variational Graph Auto-Encoderscited by 1,373
- 2020LightGCN: Simplifying and Powering Graph Convolution Network for Recommendationcited by 1,134
- 2018Graph Convolutional Neural Networks for Web-Scale Recommender Systemscited by 1,133
- 2016Revisiting Semi-Supervised Learning with Graph Embeddingscited by 970
- 2018Link Prediction Based on Graph Neural Networkscited by 829
- 2021Neural Bellman-Ford Networks: A General Graph Neural Network Framework for Link Predictioncited by 273
- 2022Neo-GNNs: Neighborhood Overlap-aware Graph Neural Networks for Link Predictioncited by 78
7 more
- 2021Learning from Counterfactual Links for Link Predictioncited by 69
- 2023Neural Common Neighbor with Completion for Link Predictioncited by 64
- 2021Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoodscited by 57
- 2022Uncovering the Structural Fairness in Graph Contrastive Learningcited by 29
- 2020Few-shot link prediction via graph neural networks for Covid-19 drug-repurposingcited by 21
- 2021Edge Proposal Sets for Link Predictioncited by 16
- 2023A Topological Perspective on Demystifying GNN-Based Link Prediction Performancecited by 11
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Citing papers per year: 2024: 4; 2025: 2; 2026: 3.
9 papers.
- 2024A Survey of Deep Graph Learning under Distribution Shifts: from Graph Out-of-Distribution Generalization to Adaptationcited by 16
- 2024Smoothness Really Matters: A Simple Yet Effective Approach for Unsupervised Graph Domain Adaptationcited by 14
- 2024Reconsidering the Performance of GAE in Link Predictioncited by 4
- 2024Graph Disentangle Causal Model: Enhancing Causal Inference in Networked Observational Datacited by 2
- 2025Representational Alignment with Chemical Induced Fit for Molecular Relational Learningcited by 2
- 2025A Community-Enhanced Graph Representation Model for Link Predictioncited by 0
- 2026Advancing Edge Classification through High-Dimensional Causal Modeling of Node-Edge Interplaycited by 0
- 2026H3: A Healthcare Three-Hop Index for Physician Referral Network Predictioncited by 0
- 2026A Survey on GNN-based Link Prediction: Techniques, Applications, and Challengescited by 0
- 2026H3: A Healthcare Three-Hop Index for Physician Referral Network Prediction4 May 2026
- 2026Advancing Edge Classification through High-Dimensional Causal Modeling of Node-Edge Interplay1 May 2026
- 2026A Survey on GNN-based Link Prediction: Techniques, Applications, and Challenges29 Apr 2026
- 2025A Community-Enhanced Graph Representation Model for Link Prediction24 Dec 2025
- 2025Representational Alignment with Chemical Induced Fit for Molecular Relational Learning7 Feb 2025
- 2024Smoothness Really Matters: A Simple Yet Effective Approach for Unsupervised Graph Domain Adaptation16 Dec 2024
- 2024Graph Disentangle Causal Model: Enhancing Causal Inference in Networked Observational Data5 Dec 2024
- 2024Reconsidering the Performance of GAE in Link Prediction6 Nov 2024
- 2024A Survey of Deep Graph Learning under Distribution Shifts: from Graph Out-of-Distribution Generalization to Adaptation25 Oct 2024