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End-to-end Stroke imaging analysis, using reservoir computing-based effective connectivity, and interpretable Artificial intelligence

arXiv 2407.12553 ↗First posted 17 Jul 2024cs.LG cs.CVcited by 0

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Abstract (arXiv)

In this paper, we propose a reservoir computing-based and directed graph analysis pipeline. The goal of this pipeline is to define an efficient brain representation for connectivity in stroke data derived from magnetic resonance imaging. Ultimately, this representation is used within a directed graph convolutional architecture and investigated with explainable artificial intelligence (AI) tools. Stroke is one of the leading causes of mortality and morbidity worldwide, and it demands precise diagnostic tools for timely intervention and improved patient outcomes. Neuroimaging data, with their rich structural and functional information, provide a fertile ground for biomarker discovery. However, the complexity and variability of information flow in the brain requires advanced analysis, especially if we consider the case of disrupted networks as those given by the brain connectome of stroke patients. To address the needs given by this complex scenario we proposed an end-to-end pipeline. This pipeline begins with reservoir computing causality, to define effective connectivity of the brain. This allows directed graph network representations which have not been fully investigated so far by graph convolutional network classifiers. Indeed, the pipeline subsequently incorporates a classification module to categorize the effective connectivity (directed graphs) of brain networks of patients versus matched healthy control. The classification led to an area under the curve of 0.69 with the given heterogeneous dataset. Thanks to explainable tools, an interpretation of disrupted networks across the brain networks was possible. This elucidates the effective connectivity biomarker's contribution to stroke classification, fostering insights into disease mechanisms and treatment responses.

Key facts. No citing papers in the map yet (data through 7 Oct 2026). Builds on 9 of its 57 references that are in the map. First posted on arXiv 17 Jul 2024.

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References · 9

  1. 2016"Why Should I Trust You?": Explaining the Predictions of Any Classifiercited by 5,040
  2. 2018Graph Neural Networks: A Review of Methods and Applicationscited by 1,571
  3. 2016Geometric deep learning: going beyond Euclidean datacited by 1,042
  4. 2021MagNet: A Neural Network for Directed Graphscited by 104
  5. 2023Everything is Connected: Graph Neural Networkscited by 85
  6. 2023Strengthening structural baselines for graph classification using Local Topological Profilecited by 7
  7. 2015Structure-Preserving Sparsification of Social Networkscited by 3
  8. 2021PyRCN: A Toolbox for Exploration and Application of Reservoir Computing Networkscited by 3
  9. 2022Emergent Computations in Trained Artificial Neural Networks and Real Brainscited by 1

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