mlsanityData to 14 Oct 2026

Thermodynamic Transferability in Coarse-Grained Force Fields using Graph Neural Networks

arXiv 2406.12112 ↗First posted 17 Jun 2024physics.chem-ph cs.LGcited by 2

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Abstract (arXiv)

Coarse-graining is a molecular modeling technique in which an atomistic system is represented in a simplified fashion that retains the most significant system features that contribute to a target output, while removing the degrees of freedom that are less relevant. This reduction in model complexity allows coarse-grained molecular simulations to reach increased spatial and temporal scales compared to corresponding all-atom models. A core challenge in coarse-graining is to construct a force field that represents the interactions in the new representation in a way that preserves the atomistic-level properties. Many approaches to building coarse-grained force fields have limited transferability between different thermodynamic conditions as a result of averaging over internal fluctuations at a specific thermodynamic state point. Here, we use a graph-convolutional neural network architecture, the Hierarchically Interacting Particle Neural Network with Tensor Sensitivity (HIP-NN-TS), to develop a highly automated training pipeline for coarse grained force fields which allows for studying the transferability of coarse-grained models based on the force-matching approach. We show that this approach not only yields highly accurate force fields, but also that these force fields are more transferable through a variety of thermodynamic conditions. These results illustrate the potential of machine learning techniques such as graph neural networks to improve the construction of transferable coarse-grained force fields.

Key facts. Cited by 2 papers in the map (data through 14 Oct 2026). Builds on 6 of its 102 references that are in the map. First posted on arXiv 17 Jun 2024.

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6 of 102 references.

References · 6

  1. 2020Machine Learning Force Fieldscited by 207
  2. 2018Machine Learning of coarse-grained Molecular Dynamics Force Fieldscited by 69
  3. 2020Coarse Graining Molecular Dynamics with Graph Neural Networkscited by 56
  4. 2017Hierarchical modeling of molecular energies using a deep neural networkcited by 37
  5. 2023Statistically Optimal Force Aggregation for Coarse-Graining Molecular Dynamicscited by 9
  6. 2020Simple and efficient algorithms for training machine learning potentials to force datacited by 1

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Citing papers per year: 2025: 1; 2026: 1.

2 papers.