Exploring the Generalization of Cancer Clinical Trial Eligibility Classifiers Across Diseases
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Abstract (arXiv)
Clinical trials are pivotal in medical research, and NLP can enhance their success, with application in recruitment. This study aims to evaluate the generalizability of eligibility classification across a broad spectrum of clinical trials. Starting with phase 3 cancer trials, annotated with seven eligibility exclusions, then to determine how well models can generalize to non-cancer and non-phase 3 trials. To assess this, we have compiled eligibility criteria data for five types of trials: (1) additional phase 3 cancer trials, (2) phase 1 and 2 cancer trials, (3) heart disease trials, (4) type 2 diabetes trials, and (5) observational trials for any disease, comprising 2,490 annotated eligibility criteria across seven exclusion types. Our results show that models trained on the extensive cancer dataset can effectively handle criteria commonly found in non-cancer trials, such as autoimmune diseases. However, they struggle with criteria disproportionately prevalent in cancer trials, like prior malignancy. We also experiment with few-shot learning, demonstrating that a limited number of disease-specific examples can partially overcome this performance gap. We are releasing this new dataset of annotated eligibility statements to promote the development of cross-disease generalization in clinical trial classification.
Key facts. Cited by 3 papers in the map (data through 14 Oct 2026). Builds on 7 of its 33 references that are in the map. First posted on arXiv 25 Mar 2024.
Builds on
7 of 33 references.
References · 7
- 2019Publicly Available Clinical BERT Embeddingscited by 1,002
- 2017Medical Text Classification using Convolutional Neural Networkscited by 19
- 2023CohortGPT: An Enhanced GPT for Participant Recruitment in Clinical Studycited by 19
- 2022The Leaf Clinical Trials Corpus: a new resource for query generation from clinical trial eligibility criteriacited by 10
- 2021Clinical Trial Information Extraction with BERTcited by 8
- 2023Text Classification of Cancer Clinical Trial Eligibility Criteriacited by 7
- 2020Information Extraction of Clinical Trial Eligibility Criteriacited by 6
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Citing papers per year: 2024: 3.
3 papers.
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