Interpretable Machine Learning for TabPFN
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Abstract (arXiv)
The recently developed Prior-Data Fitted Networks (PFNs) have shown very promising results for applications in low-data regimes. The TabPFN model, a special case of PFNs for tabular data, is able to achieve state-of-the-art performance on a variety of classification tasks while producing posterior predictive distributions in mere seconds by in-context learning without the need for learning parameters or hyperparameter tuning. This makes TabPFN a very attractive option for a wide range of domain applications. However, a major drawback of the method is its lack of interpretability. Therefore, we propose several adaptations of popular interpretability methods that we specifically design for TabPFN. By taking advantage of the unique properties of the model, our adaptations allow for more efficient computations than existing implementations. In particular, we show how in-context learning facilitates the estimation of Shapley values by avoiding approximate retraining and enables the use of Leave-One-Covariate-Out (LOCO) even when working with large-scale Transformers. In addition, we demonstrate how data valuation methods can be used to address scalability challenges of TabPFN. Our proposed methods are implemented in a package tabpfn_iml and made available at https://github.com/david-rundel/tabpfn_iml.
Key facts. Cited by 11 papers in the map (data through 14 Oct 2026). Builds on 17 of its 26 references that are in the map. First posted on arXiv 16 Mar 2024.
Builds on
17 of 26 references.
References · 17
- 2017Attention Is All You Needcited by 60,361
- 2017A Unified Approach to Interpreting Model Predictionscited by 6,555
- 2022TabPFN: A Transformer That Solves Small Tabular Classification Problems in a Secondcited by 674
- 2016Distribution-Free Predictive Inference For Regressioncited by 668
- 2019Data Shapley: Equitable Valuation of Data for Machine Learningcited by 629
- 2021Transformers Can Do Bayesian Inferencecited by 360
- 2023When Do Neural Nets Outperform Boosted Trees on Tabular Data?cited by 223
- 2016Visualizing the Effects of Predictor Variables in Black Box Supervised Learning Modelscited by 213
- 2017OpenML Benchmarking Suitescited by 178
- 2020Multi-Objective Counterfactual Explanationscited by 157
- 2021Hyperparameter Optimization: Foundations, Algorithms, Best Practices and Open Challengescited by 145
- 2022Data Banzhaf: A Robust Data Valuation Framework for Machine Learningcited by 132
5 more
- 2022The Shapley Value in Machine Learningcited by 98
- 2023Statistical Foundations of Prior-Data Fitted Networkscited by 65
- 2024TuneTables: Context Optimization for Scalable Prior-Data Fitted Networkscited by 47
- 2023Data-OOB: Out-of-bag Estimate as a Simple and Efficient Data Valuecited by 38
- 2022MAPIE: an open-source library for distribution-free uncertainty quantificationcited by 17
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Citing papers per year: 2024: 3; 2025: 1; 2026: 7.
11 papers.
- 2024Retrieval & Fine-Tuning for In-Context Tabular Modelscited by 59
- 2024shapiq: Shapley Interactions for Machine Learningcited by 43
- 2025Position: The Future of Bayesian Prediction Is Prior-Fittedcited by 20
- 2026Explainable Load Forecasting with Covariate-Informed Time Series Foundation Modelscited by 4
- 2024An Efficient Model-Agnostic Approach for Uncertainty Estimation in Data-Restricted Pedometric Applicationscited by 3
- 2026VIP-COP: Context Optimization for Tabular Foundation Modelscited by 3
- 2026Computing Conditional Shapley Values Using Tabular Foundation Modelscited by 1
- 2026Nearly Optimal Bayesian Inference for Structural Missingnesscited by 0
- 2026Few-shot Cross-country Generalization of Tabular Machine Learning and Foundation Models for Childhood Anemia Prediction under Distribution Shiftcited by 0
- 2026ShaplEIG: Bayesian Experimental Design for Shapley Value Estimationcited by 0
- 2026Characterizing the Separability Gap in Prior-Data Fitted Networkscited by 0
- 2026Characterizing the Separability Gap in Prior-Data Fitted Networks10 Oct 2026
- 2026ShaplEIG: Bayesian Experimental Design for Shapley Value Estimation1 Jun 2026
- 2026Few-shot Cross-country Generalization of Tabular Machine Learning and Foundation Models for Childhood Anemia Prediction under Distribution Shift26 May 2026
- 2026VIP-COP: Context Optimization for Tabular Foundation Models13 May 2026
- 2026Explainable Load Forecasting with Covariate-Informed Time Series Foundation Models30 Apr 2026
- 2026Computing Conditional Shapley Values Using Tabular Foundation Models10 Feb 2026
- 2026Nearly Optimal Bayesian Inference for Structural Missingness26 Jan 2026
- 2025Position: The Future of Bayesian Prediction Is Prior-Fitted29 May 2025
- 2024shapiq: Shapley Interactions for Machine Learning2 Oct 2024
- 2024An Efficient Model-Agnostic Approach for Uncertainty Estimation in Data-Restricted Pedometric Applications18 Sep 2024
- 2024Retrieval & Fine-Tuning for In-Context Tabular Models7 Jun 2024