Large Language Models for Scientific Information Extraction: An Empirical Study for Virology
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Abstract (arXiv)
In this paper, we champion the use of structured and semantic content representation of discourse-based scholarly communication, inspired by tools like Wikipedia infoboxes or structured Amazon product descriptions. These representations provide users with a concise overview, aiding scientists in navigating the dense academic landscape. Our novel automated approach leverages the robust text generation capabilities of LLMs to produce structured scholarly contribution summaries, offering both a practical solution and insights into LLMs' emergent abilities. For LLMs, the prime focus is on improving their general intelligence as conversational agents. We argue that these models can also be applied effectively in information extraction (IE), specifically in complex IE tasks within terse domains like Science. This paradigm shift replaces the traditional modular, pipelined machine learning approach with a simpler objective expressed through instructions. Our results show that finetuned FLAN-T5 with 1000x fewer parameters than the state-of-the-art GPT-davinci is competitive for the task.
Key facts. Cited by 12 papers in the map (data through 7 Oct 2026). Builds on 25 of its 65 references that are in the map. First posted on arXiv 18 Jan 2024.
Builds on
25 of 65 references.
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13 more
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Built on by
Citing papers per year: 2024: 6; 2025: 2; 2026: 4.
12 papers.
- 2024Automatically Extracting Numerical Results from Randomized Controlled Trials with Large Language Modelscited by 9
- 202534 Examples of LLM Applications in Materials Science and Chemistry: Towards Automation, Assistants, Agents, and Accelerated Scientific Discoverycited by 9
- 2024Reflections from the 2024 Large Language Model (LLM) Hackathon for Applications in Materials Science and Chemistrycited by 8
- 2025Mining for Species, Locations, Habitats, and Ecosystems from Scientific Papers in Invasion Biology: A Large-Scale Exploratory Study with Large Language Modelscited by 4
- 2024Contri(e)ve: Context + Retrieve for Scholarly Question Answeringcited by 2
- 2024From Keywords to Structured Summaries: Streamlining Scholarly Information Accesscited by 1
- 2024Towards Global AI Inclusivity: A Large-Scale Multilingual Terminology Dataset (GIST)cited by 1
- 2026QoS-QoE Translation with Large Language Modelcited by 1
- 2024Exploring the Latest LLMs for Leaderboard Extractioncited by 0
- 2026The Scientific Contribution Graph: Automated Literature-based Technological Roadmapping at Scalecited by 0
- 2026SciSchema.org: A Multidisciplinary Collection of Schemas for Structured Scientific Process Descriptionscited by 0
- 2026From Weak Task Specifications to Scientific Extraction Agents: Optimizing Task Constructioncited by 0
- 2026From Weak Task Specifications to Scientific Extraction Agents: Optimizing Task Construction28 Sep 2026
- 2026SciSchema.org: A Multidisciplinary Collection of Schemas for Structured Scientific Process Descriptions30 Jul 2026
- 2026The Scientific Contribution Graph: Automated Literature-based Technological Roadmapping at Scale14 May 2026
- 2026QoS-QoE Translation with Large Language Model9 Apr 2026
- 202534 Examples of LLM Applications in Materials Science and Chemistry: Towards Automation, Assistants, Agents, and Accelerated Scientific Discovery5 May 2025
- 2025Mining for Species, Locations, Habitats, and Ecosystems from Scientific Papers in Invasion Biology: A Large-Scale Exploratory Study with Large Language Models30 Jan 2025
- 2024Towards Global AI Inclusivity: A Large-Scale Multilingual Terminology Dataset (GIST)24 Dec 2024
- 2024Reflections from the 2024 Large Language Model (LLM) Hackathon for Applications in Materials Science and Chemistry20 Nov 2024
- 2024Contri(e)ve: Context + Retrieve for Scholarly Question Answering13 Sep 2024
- 2024Exploring the Latest LLMs for Leaderboard Extraction6 Jun 2024
- 2024Automatically Extracting Numerical Results from Randomized Controlled Trials with Large Language Models2 May 2024
- 2024From Keywords to Structured Summaries: Streamlining Scholarly Information Access22 Feb 2024