Fully Automated Tumor Segmentation for Brain MRI data using Multiplanner UNet
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Abstract (arXiv)
Automated segmentation of distinct tumor regions is critical for accurate diagnosis and treatment planning in pediatric brain tumors. This study evaluates the efficacy of the Multi-Planner U-Net (MPUnet) approach in segmenting different tumor subregions across three challenging datasets: Pediatrics Tumor Challenge (PED), Brain Metastasis Challenge (MET), and Sub-Sahara-Africa Adult Glioma (SSA). These datasets represent diverse scenarios and anatomical variations, making them suitable for assessing the robustness and generalization capabilities of the MPUnet model. By utilizing multi-planar information, the MPUnet architecture aims to enhance segmentation accuracy. Our results show varying performance levels across the evaluated challenges, with the tumor core (TC) class demonstrating relatively higher segmentation accuracy. However, variability is observed in the segmentation of other classes, such as the edema and enhancing tumor (ET) regions. These findings emphasize the complexity of brain tumor segmentation and highlight the potential for further refinement of the MPUnet approach and inclusion of MRI more data and preprocessing.
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References · 10
- 2016DeepLab: Semantic Image Segmentation with Deep Convolutional Nets, Atrous Convolution, and Fully Connected CRFscited by 3,239
- 2016V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentationcited by 2,284
- 2018Attention U-Net: Learning Where to Look for the Pancreascited by 1,420
- 2021The Medical Segmentation Decathloncited by 620
- 2021The RSNA-ASNR-MICCAI BraTS 2021 Benchmark on Brain Tumor Segmentation and Radiogenomic Classificationcited by 507
- 2021MedPerf: Open Benchmarking Platform for Medical Artificial Intelligence using Federated Evaluationcited by 88
- 2023The Brain Tumor Segmentation (BraTS) Challenge 2023: Glioma Segmentation in Sub-Saharan Africa Patient Population (BraTS-Africa)cited by 51
- 2023The Brain Tumor Segmentation (BraTS) Challenge 2023: Focus on Pediatrics (CBTN-CONNECT-DIPGR-ASNR-MICCAI BraTS-PEDs)cited by 49
- 20173D Anisotropic Hybrid Network: Transferring Convolutional Features from 2D Images to 3D Anisotropic Volumescited by 38
- 2019One Network to Segment Them All: A General, Lightweight System for Accurate 3D Medical Image Segmentationcited by 24
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