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Emerging Challenges in Personalized Medicine: Assessing Demographic Effects on Biomedical Question Answering Systems

arXiv 2310.10571 ↗First posted 16 Oct 2023cs.CL cs.LGcited by 0

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Abstract (arXiv)

State-of-the-art question answering (QA) models exhibit a variety of social biases (e.g., with respect to sex or race), generally explained by similar issues in their training data. However, what has been overlooked so far is that in the critical domain of biomedicine, any unjustified change in model output due to patient demographics is problematic: it results in the unfair treatment of patients. Selecting only questions on biomedical topics whose answers do not depend on ethnicity, sex, or sexual orientation, we ask the following research questions: (RQ1) Do the answers of QA models change when being provided with irrelevant demographic information? (RQ2) Does the answer of RQ1 differ between knowledge graph (KG)-grounded and text-based QA systems? We find that irrelevant demographic information change up to 15% of the answers of a KG-grounded system and up to 23% of the answers of a text-based system, including changes that affect accuracy. We conclude that unjustified answer changes caused by patient demographics are a frequent phenomenon, which raises fairness concerns and should be paid more attention to.

Key facts. No citing papers in the map yet (data through 7 Oct 2026). Builds on 21 of its 30 references that are in the map. First posted on arXiv 16 Oct 2023.

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References · 21

  1. 2018BERT: Pre-training of Deep Bidirectional Transformers for Language Understandingcited by 40,204
  2. 2020What Disease does this Patient Have? A Large-scale Open Domain Question Answering Dataset from Medical Examscited by 1,324
  3. 2020Domain-Specific Language Model Pretraining for Biomedical Natural Language Processingcited by 996
  4. 2020Language (Technology) is Power: A Critical Survey of "Bias" in NLPcited by 951
  5. 2020StereoSet: Measuring stereotypical bias in pretrained language modelscited by 911
  6. 2020CrowS-Pairs: A Challenge Dataset for Measuring Social Biases in Masked Language Modelscited by 703
  7. 2019The Woman Worked as a Babysitter: On Biases in Language Generationcited by 540
  8. 2021QA-GNN: Reasoning with Language Models and Knowledge Graphs for Question Answeringcited by 386
  9. 2020Self-Alignment Pretraining for Biomedical Entity Representationscited by 233
  10. 2022LinkBERT: Pretraining Language Models with Document Linkscited by 209
  11. 2018emrQA: A Large Corpus for Question Answering on Electronic Medical Recordscited by 134
  12. 2019A Question-Entailment Approach to Question Answeringcited by 133
9 more
  1. 2021Gender Bias in Machine Translationcited by 116
  2. 2019HEAD-QA: A Healthcare Dataset for Complex Reasoningcited by 100
  3. 2020Hurtful Words: Quantifying Biases in Clinical Contextual Word Embeddingscited by 79
  4. 2019On Measuring Gender Bias in Translation of Gender-neutral Pronounscited by 59
  5. 2021Hi, my name is Martha: Using names to measure and mitigate bias in generative dialogue modelscited by 23
  6. 2021Q-Pain: A Question Answering Dataset to Measure Social Bias in Pain Managementcited by 16
  7. 2022Learning to Ask Like a Physiciancited by 16
  8. 2021What Would it Take to get Biomedical QA Systems into Practice?cited by 7
  9. 2021Exploring Language Patterns in a Medical Licensure Exam Item Bankcited by 1

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