SAM-OCTA: A Fine-Tuning Strategy for Applying Foundation Model to OCTA Image Segmentation Tasks
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Abstract (arXiv)
In the analysis of optical coherence tomography angiography (OCTA) images, the operation of segmenting specific targets is necessary. Existing methods typically train on supervised datasets with limited samples (approximately a few hundred), which can lead to overfitting. To address this, the low-rank adaptation technique is adopted for foundation model fine-tuning and proposed corresponding prompt point generation strategies to process various segmentation tasks on OCTA datasets. This method is named SAM-OCTA and has been experimented on the publicly available OCTA-500 dataset. While achieving state-of-the-art performance metrics, this method accomplishes local vessel segmentation as well as effective artery-vein segmentation, which was not well-solved in previous works. The code is available at: https://github.com/ShellRedia/SAM-OCTA.
Key facts. Cited by 14 papers in the map (data through 14 Oct 2026). Builds on 9 of its 23 references that are in the map. First posted on arXiv 21 Sep 2023.
Builds on
9 of 23 references.
References · 9
- 2020An Image is Worth 16x16 Words: Transformers for Image Recognition at Scalecited by 30,186
- 2021LoRA: Low-Rank Adaptation of Large Language Modelscited by 14,380
- 2023Segment Anythingcited by 8,234
- 2018Albumentations: fast and flexible image augmentationscited by 560
- 2023Medical SAM Adapter: Adapting Segment Anything Model for Medical Image Segmentationcited by 490
- 2020clDice -- A Novel Topology-Preserving Loss Function for Tubular Structure Segmentationcited by 294
- 2023Customized Segment Anything Model for Medical Image Segmentationcited by 280
- 2023A Comprehensive Survey on Segment Anything Model for Vision and Beyondcited by 64
- 2021A Deep Learning-based Quality Assessment and Segmentation System with a Large-scale Benchmark Dataset for Optical Coherence Tomographic Angiography Imagecited by 9
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Citing papers per year: 2023: 3; 2024: 6; 2025: 3; 2026: 2.
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- 2023ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Biomedical Imagecited by 48
- 2024vesselFM: A Foundation Model for Universal 3D Blood Vessel Segmentationcited by 18
- 2023A Systematic Review of Deep Learning-based Research on Radiology Report Generationcited by 14
- 2024MultiverSeg: Scalable Interactive Segmentation of Biomedical Imaging Datasets with In-Context Guidancecited by 13
- 2025Foundation Models in Medical Imaging: A Review and Outlookcited by 8
- 2024Dr-SAM: An End-to-End Framework for Vascular Segmentation, Diameter Estimation, and Anomaly Detection on Angiography Imagescited by 6
- 2023SAM-OCTA: Prompting Segment-Anything for OCTA Image Segmentationcited by 5
- 2024Scribbles for All: Benchmarking Scribble Supervised Segmentation Across Datasetscited by 4
- 2024SAM-OCTA2: Layer Sequence OCTA Segmentation with Fine-tuned Segment Anything Model 2cited by 3
- 2024Snake with Shifted Window: Learning to Adapt Vessel Pattern for OCTA Segmentationcited by 0
- 2025VAMPIRE: Uncovering Vessel Directional and Morphological Information from OCTA Images for Cardiovascular Disease Risk Factor Predictioncited by 0
- 2025Joint-octamamba:an octa joint segmentation network based on feature enhanced mambacited by 0
- 2026An Ultra-Widefield Swept-Source OCTA Dataset and a Polar-Gated Mamba Network for Retinal Vessel Segmentation11 Sep 2026
- 2026Gaze into the Details: Locality-Sensitive Enhancement for OCTA Retinal Vessel Segmentation20 May 2026
- 2025Joint-octamamba:an octa joint segmentation network based on feature enhanced mamba15 Sep 2025
- 2025VAMPIRE: Uncovering Vessel Directional and Morphological Information from OCTA Images for Cardiovascular Disease Risk Factor Prediction26 Jul 2025
- 2025Foundation Models in Medical Imaging: A Review and Outlook10 Jun 2025
- 2024MultiverSeg: Scalable Interactive Segmentation of Biomedical Imaging Datasets with In-Context Guidance19 Dec 2024
- 2024vesselFM: A Foundation Model for Universal 3D Blood Vessel Segmentation26 Nov 2024
- 2024SAM-OCTA2: Layer Sequence OCTA Segmentation with Fine-tuned Segment Anything Model 214 Sep 2024
- 2024Scribbles for All: Benchmarking Scribble Supervised Segmentation Across Datasets22 Aug 2024
- 2024Snake with Shifted Window: Learning to Adapt Vessel Pattern for OCTA Segmentation28 Apr 2024
- 2024Dr-SAM: An End-to-End Framework for Vascular Segmentation, Diameter Estimation, and Anomaly Detection on Angiography Images25 Apr 2024
- 2023ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Biomedical Image12 Dec 2023
- 2023ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Biomedical Imagecited by 48
- 2024vesselFM: A Foundation Model for Universal 3D Blood Vessel Segmentationcited by 18
- 2023A Systematic Review of Deep Learning-based Research on Radiology Report Generationcited by 14
- 2024MultiverSeg: Scalable Interactive Segmentation of Biomedical Imaging Datasets with In-Context Guidancecited by 13
- 2025Foundation Models in Medical Imaging: A Review and Outlookcited by 8
- 2024Dr-SAM: An End-to-End Framework for Vascular Segmentation, Diameter Estimation, and Anomaly Detection on Angiography Imagescited by 6
- 2023SAM-OCTA: Prompting Segment-Anything for OCTA Image Segmentationcited by 5
- 2024Scribbles for All: Benchmarking Scribble Supervised Segmentation Across Datasetscited by 4
- 2024SAM-OCTA2: Layer Sequence OCTA Segmentation with Fine-tuned Segment Anything Model 2cited by 3
- 2024Snake with Shifted Window: Learning to Adapt Vessel Pattern for OCTA Segmentationcited by 0
- 2025VAMPIRE: Uncovering Vessel Directional and Morphological Information from OCTA Images for Cardiovascular Disease Risk Factor Predictioncited by 0
- 2026Gaze into the Details: Locality-Sensitive Enhancement for OCTA Retinal Vessel Segmentationcited by 0
- 2026Gaze into the Details: Locality-Sensitive Enhancement for OCTA Retinal Vessel Segmentation20 May 2026
- 2025VAMPIRE: Uncovering Vessel Directional and Morphological Information from OCTA Images for Cardiovascular Disease Risk Factor Prediction26 Jul 2025
- 2025Foundation Models in Medical Imaging: A Review and Outlook10 Jun 2025
- 2024MultiverSeg: Scalable Interactive Segmentation of Biomedical Imaging Datasets with In-Context Guidance19 Dec 2024
- 2024vesselFM: A Foundation Model for Universal 3D Blood Vessel Segmentation26 Nov 2024
- 2024SAM-OCTA2: Layer Sequence OCTA Segmentation with Fine-tuned Segment Anything Model 214 Sep 2024
- 2024Scribbles for All: Benchmarking Scribble Supervised Segmentation Across Datasets22 Aug 2024
- 2024Snake with Shifted Window: Learning to Adapt Vessel Pattern for OCTA Segmentation28 Apr 2024
- 2024Dr-SAM: An End-to-End Framework for Vascular Segmentation, Diameter Estimation, and Anomaly Detection on Angiography Images25 Apr 2024
- 2023ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Biomedical Image12 Dec 2023
- 2023A Systematic Review of Deep Learning-based Research on Radiology Report Generation23 Nov 2023
- 2023SAM-OCTA: Prompting Segment-Anything for OCTA Image Segmentation11 Oct 2023