Chat2Brain: A Method for Mapping Open-Ended Semantic Queries to Brain Activation Maps
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Abstract (arXiv)
Over decades, neuroscience has accumulated a wealth of research results in the text modality that can be used to explore cognitive processes. Meta-analysis is a typical method that successfully establishes a link from text queries to brain activation maps using these research results, but it still relies on an ideal query environment. In practical applications, text queries used for meta-analyses may encounter issues such as semantic redundancy and ambiguity, resulting in an inaccurate mapping to brain images. On the other hand, large language models (LLMs) like ChatGPT have shown great potential in tasks such as context understanding and reasoning, displaying a high degree of consistency with human natural language. Hence, LLMs could improve the connection between text modality and neuroscience, resolving existing challenges of meta-analyses. In this study, we propose a method called Chat2Brain that combines LLMs to basic text-2-image model, known as Text2Brain, to map open-ended semantic queries to brain activation maps in data-scarce and complex query environments. By utilizing the understanding and reasoning capabilities of LLMs, the performance of the mapping model is optimized by transferring text queries to semantic queries. We demonstrate that Chat2Brain can synthesize anatomically plausible neural activation patterns for more complex tasks of text queries.
Key facts. Cited by 5 papers in the map (data through 14 Oct 2026). Builds on 12 of its 33 references that are in the map. First posted on arXiv 10 Sep 2023.
Builds on
12 of 33 references.
References · 12
- 2022PaLM: Scaling Language Modeling with Pathwayscited by 5,326
- 2022OPT: Open Pre-trained Transformer Language Modelscited by 3,512
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- 2020NeuroQuery: comprehensive meta-analysis of human brain mappingcited by 10
- 2021Text2Brain: Synthesis of Brain Activation Maps from Free-form Text Querycited by 5
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Citing papers per year: 2023: 1; 2024: 1; 2025: 3.
5 papers.
- 2024Understanding LLMs: A Comprehensive Overview from Training to Inferencecited by 59
- 2023Holistic Evaluation of GPT-4V for Biomedical Imagingcited by 19
- 2025Transforming Evidence Synthesis: A Systematic Review of the Evolution of Automated Meta-Analysis in the Age of AIcited by 7
- 2025Large Language Models for Bioinformaticscited by 3
- 2025Automated Risk-of-Bias Assessment of Randomized Controlled Trials: A First Look at a GEPA-trained Programmatic Prompting Frameworkcited by 3
- 2025Automated Risk-of-Bias Assessment of Randomized Controlled Trials: A First Look at a GEPA-trained Programmatic Prompting Framework1 Dec 2025
- 2025Transforming Evidence Synthesis: A Systematic Review of the Evolution of Automated Meta-Analysis in the Age of AI28 Apr 2025
- 2025Large Language Models for Bioinformatics10 Jan 2025
- 2024Understanding LLMs: A Comprehensive Overview from Training to Inference4 Jan 2024
- 2023Holistic Evaluation of GPT-4V for Biomedical Imaging10 Nov 2023
Similar, not cited
Close in wording, no citation either way
- 2025fMRI-LM: Towards a Universal Foundation Model for Language-Aligned fMRI Understanding
- 2025Talking to the brain: Using Large Language Models as Proxies to Model Brain Semantic Representation
- 2025Addressing accuracy and hallucination of LLMs in Alzheimer's disease research through knowledge graphs
- 2024What Are Large Language Models Mapping to in the Brain? A Case Against Over-Reliance on Brain Scores
- 2024BrainChat: Decoding Semantic Information from fMRI using Vision-language Pretrained Models
- 2026The Capacity of Thought: Benchmarking Llama 3.2 in Semantic fMRI Neural Language Decoding and Improving the Huth Encoding-Model Baseline
- 2026Cognitive Expert Language Models Better Align with the Corresponding Brain Systems
- 2026Sparse Autoencoders Map Brain-LLM Alignment onto Cortical Semantic Topography