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PolyGET: Accelerating Polymer Simulations by Accurate and Generalizable Forcefield with Equivariant Transformer

arXiv 2309.00585 ↗First posted 1 Sep 2023cs.LG cond-mat.softcited by 0

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Abstract (arXiv)

Polymer simulation with both accuracy and efficiency is a challenging task. Machine learning (ML) forcefields have been developed to achieve both the accuracy of ab initio methods and the efficiency of empirical force fields. However, existing ML force fields are usually limited to single-molecule settings, and their simulations are not robust enough. In this paper, we present PolyGET, a new framework for Polymer Forcefields with Generalizable Equivariant Transformers. PolyGET is designed to capture complex quantum interactions between atoms and generalize across various polymer families, using a deep learning model called Equivariant Transformers. We propose a new training paradigm that focuses exclusively on optimizing forces, which is different from existing methods that jointly optimize forces and energy. This simple force-centric objective function avoids competing objectives between energy and forces, thereby allowing for learning a unified forcefield ML model over different polymer families. We evaluated PolyGET on a large-scale dataset of 24 distinct polymer types and demonstrated state-of-the-art performance in force accuracy and robust MD simulations. Furthermore, PolyGET can simulate large polymers with high fidelity to the reference ab initio DFT method while being able to generalize to unseen polymers.

Key facts. No citing papers in the map yet (data through 14 Oct 2026). Builds on 13 of its 41 references that are in the map. First posted on arXiv 1 Sep 2023.

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References · 13

  1. 2017Attention Is All You Needcited by 60,361
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  3. 2016Identity Mappings in Deep Residual Networkscited by 1,965
  4. 2021E(n) Equivariant Graph Neural Networkscited by 965
  5. 2021E(3)-Equivariant Graph Neural Networks for Data-Efficient and Accurate Interatomic Potentialscited by 708
  6. 2019Large Batch Optimization for Deep Learning: Training BERT in 76 minutescited by 674
  7. 2020SE(3)-Transformers: 3D Roto-Translation Equivariant Attention Networkscited by 607
  8. 2020Directional Message Passing for Molecular Graphscited by 561
  9. 2021GemNet: Universal Directional Graph Neural Networks for Moleculescited by 343
  10. 2020Machine Learning Force Fieldscited by 207
  11. 2022TorchMD-NET: Equivariant Transformers for Neural Network based Molecular Potentialscited by 182
  12. 2022Forces are not Enough: Benchmark and Critical Evaluation for Machine Learning Force Fields with Molecular Simulationscited by 95
1 more
  1. 2019Universal approximations of permutation invariant/equivariant functions by deep neural networkscited by 29

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