mlsanityData to 14 Oct 2026

A Unified View of Deep Learning for Reaction and Retrosynthesis Prediction: Current Status and Future Challenges

arXiv 2306.15890 ↗First posted 28 Jun 2023cs.LG physics.chem-ph q-bio.QMcited by 4

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Abstract (arXiv)

Reaction and retrosynthesis prediction are fundamental tasks in computational chemistry that have recently garnered attention from both the machine learning and drug discovery communities. Various deep learning approaches have been proposed to tackle these problems, and some have achieved initial success. In this survey, we conduct a comprehensive investigation of advanced deep learning-based models for reaction and retrosynthesis prediction. We summarize the design mechanisms, strengths, and weaknesses of state-of-the-art approaches. Then, we discuss the limitations of current solutions and open challenges in the problem itself. Finally, we present promising directions to facilitate future research. To our knowledge, this paper is the first comprehensive and systematic survey that seeks to provide a unified understanding of reaction and retrosynthesis prediction.

Key facts. Cited by 4 papers in the map (data through 14 Oct 2026). Builds on 21 of its 44 references that are in the map. First posted on arXiv 28 Jun 2023.

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21 of 44 references.

References · 21

  1. 2017Attention Is All You Needcited by 60,361
  2. 2018Molecular Transformer - A Model for Uncertainty-Calibrated Chemical Reaction Predictioncited by 229
  3. 2020Retrosynthesis Prediction with Conditional Graph Logic Networkcited by 104
  4. 2017Predicting Organic Reaction Outcomes with Weisfeiler-Lehman Networkcited by 103
  5. 2020Molecule Edit Graph Attention Network: Modeling Chemical Reactions as Sequences of Graph Editscited by 88
  6. 2017Retrosynthetic reaction prediction using neural sequence-to-sequence modelscited by 86
  7. 2020A Graph to Graphs Framework for Retrosynthesis Predictioncited by 86
  8. 2020RetroXpert: Decompose Retrosynthesis Prediction like a Chemistcited by 68
  9. 2021Permutation invariant graph-to-sequence model for template-free retrosynthesis and reaction predictioncited by 68
  10. 2020Learning Graph Models for Retrosynthesis Predictioncited by 65
  11. 2018Graph Transformation Policy Network for Chemical Reaction Predictioncited by 56
  12. 2018A Generative Model For Electron Pathscited by 31
9 more
  1. 2020Energy-based View of Retrosynthesiscited by 24
  2. 2019Learning to Make Generalizable and Diverse Predictions for Retrosynthesiscited by 22
  3. 2021Non-Autoregressive Electron Redistribution Modeling for Reaction Predictioncited by 17
  4. 2016Neural networks for the prediction organic chemistry reactionscited by 14
  5. 2022FusionRetro: Molecule Representation Fusion via In-Context Learning for Retrosynthetic Planningcited by 14
  6. 2021RetroComposer: Composing Templates for Template-Based Retrosynthesis Predictioncited by 13
  7. 2022MARS: A Motif-based Autoregressive Model for Retrosynthesis Predictioncited by 8
  8. 2022G2GT: Retrosynthesis Prediction with Graph to Graph Attention Neural Network and Self-Trainingcited by 6
  9. 2023Doubly Stochastic Graph-based Non-autoregressive Reaction Predictioncited by 6

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