mlsanityData to 14 Oct 2026

A graphon-signal analysis of graph neural networks

arXiv 2305.15987 ↗First posted 25 May 2023cs.LGcited by 30

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Abstract (arXiv)

We present an approach for analyzing message passing graph neural networks (MPNNs) based on an extension of graphon analysis to a so called graphon-signal analysis. A MPNN is a function that takes a graph and a signal on the graph (a graph-signal) and returns some value. Since the input space of MPNNs is non-Euclidean, i.e., graphs can be of any size and topology, properties such as generalization are less well understood for MPNNs than for Euclidean neural networks. We claim that one important missing ingredient in past work is a meaningful notion of graph-signal similarity measure, that endows the space of inputs to MPNNs with a regular structure. We present such a similarity measure, called the graphon-signal cut distance, which makes the space of all graph-signals a dense subset of a compact metric space -- the graphon-signal space. Informally, two deterministic graph-signals are close in cut distance if they ``look like'' they were sampled from the same random graph-signal model. Hence, our cut distance is a natural notion of graph-signal similarity, which allows comparing any pair of graph-signals of any size and topology. We prove that MPNNs are Lipschitz continuous functions over the graphon-signal metric space. We then give two applications of this result: 1) a generalization bound for MPNNs, and, 2) the stability of MPNNs to subsampling of graph-signals. Our results apply to any regular enough MPNN on any distribution of graph-signals, making the analysis rather universal.

Key facts. Cited by 30 papers in the map (data through 14 Oct 2026). Builds on 23 of its 37 references that are in the map. First posted on arXiv 25 May 2023.

Builds on

23 of 37 references.

References · 23

  1. 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,361
  2. 2017Inductive Representation Learning on Large Graphscited by 6,320
  3. 2018How Powerful are Graph Neural Networks?cited by 4,393
  4. 2017Neural Message Passing for Quantum Chemistrycited by 3,487
  5. 2019Fast Graph Representation Learning with PyTorch Geometriccited by 2,434
  6. 2016Convolutional Neural Networks on Graphs with Fast Localized Spectral Filteringcited by 2,089
  7. 2018Weisfeiler and Leman Go Neural: Higher-order Graph Neural Networkscited by 881
  8. 2018FastGCN: Fast Learning with Graph Convolutional Networks via Importance Samplingcited by 584
  9. 2019Cluster-GCN: An Efficient Algorithm for Training Deep and Large Graph Convolutional Networkscited by 541
  10. 2020Generalization and Representational Limits of Graph Neural Networkscited by 218
  11. 2017CayleyNets: Graph Convolutional Neural Networks with Complex Rational Spectral Filterscited by 203
  12. 2019On the equivalence between graph isomorphism testing and function approximation with GNNscited by 172
11 more
  1. 2021Geometric Deep Learning on Molecular Representationscited by 113
  2. 2020Expressive Power of Invariant and Equivariant Graph Neural Networkscited by 100
  3. 2019Transferability of Spectral Graph Convolutional Neural Networkscited by 92
  4. 2020A PAC-Bayesian Approach to Generalization Bounds for Graph Neural Networkscited by 85
  5. 2020Convergence and Stability of Graph Convolutional Networks on Large Random Graphscited by 76
  6. 2022Generalization Analysis of Message Passing Neural Networks on Large Random Graphscited by 59
  7. 2021Transferability of Graph Neural Networks: an Extended Graphon Approachcited by 53
  8. 2020Graphon Signal Processingcited by 37
  9. 2023WL meet VCcited by 31
  10. 2021On the Universality of Graph Neural Networks on Large Random Graphscited by 26
  11. 2020Graph and graphon neural network stabilitycited by 15

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Cited by year (2026 to 14 Oct)

Citing papers per year: 2023: 1; 2024: 12; 2025: 10; 2026: 7.

30 papers.

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  1. 2024Generalization Bounds for Message Passing Networks on Mixture of Graphonscited by 17
  2. 2024A Manifold Perspective on the Statistical Generalization of Graph Neural Networkscited by 17
  3. 2023Approximately Equivariant Graph Networkscited by 16
  4. 2024Weisfeiler-Leman at the margin: When more expressivity matterscited by 13
  5. 2024Towards Bridging Generalization and Expressivity of Graph Neural Networkscited by 12
  6. 2025Graph neural networks extrapolate out-of-distribution for shortest pathscited by 11
  7. 2024Learning on Large Graphs using Intersecting Communitiescited by 8
  8. 2024FSW-GNN: A Bi-Lipschitz WL-Equivalent Graph Neural Networkcited by 8
  9. 2024Almost Surely Asymptotically Constant Graph Neural Networkscited by 7
  10. 2024Future Directions in the Theory of Graph Machine Learningcited by 6
  11. 2025Graph Representational Learning: When Does More Expressivity Hurt Generalization?cited by 5
  12. 2024Generalization of Graph Neural Networks is Robust to Model Mismatchcited by 4
18 more
  1. 2025Learning from one graph: transductive learning guarantees via the geometry of small random worldscited by 3
  2. 2026Bridging Input Feature Spaces Towards Graph Foundation Modelscited by 3
  3. 2024Equivariant Machine Learning on Graphs with Nonlinear Spectral Filterscited by 2
  4. 2025Efficient Learning on Large Graphs using a Densifying Regularity Lemmacited by 2
  5. 2025Understanding Generalization in Node and Link Predictioncited by 2
  6. 2025Learning graphons from data: Random walks, transfer operators, and spectral clusteringcited by 2
  7. 2025On the Rademacher Complexity of Graph Neural Networks: Unifying Expressivity and Geometrycited by 2
  8. 2024Graphons of Line Graphscited by 1
  9. 2024PieClam: A Universal Graph Autoencoder Based on Overlapping Inclusive and Exclusive Communitiescited by 1
  10. 2025A Note on Graphon-Signal Analysis of Graph Neural Networkscited by 1
  11. 2025From Small to Large: Generalization Bounds for Transformers on Variable-Size Inputscited by 1
  12. 2026Topology-Aware PAC-Bayesian Generalization Analysis for Graph Neural Networkscited by 1
  13. 2025A Spectral Framework for Graph Neural Operators: Convergence Guarantees and Tradeoffscited by 0
  14. 2026Neural Networks With Dense Weights Are Not Universal Approximatorscited by 0
  15. 2026Graph Learning Should Move Beyond Restrictive Views of Spectral and Message-Passing GNNscited by 0
  16. 2026A Topological Characterization of Graph Neural Networks via Stochastic Block Model Embeddings on the n-Spherecited by 0
  17. 2026Warm-starting PDE solvers with any-dimensional machine learningcited by 0
  18. 2026Dimension-Free Scaling Laws for Size Generalization: An Exponential Separationcited by 0