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Robust leave-one-out cross-validation for high-dimensional Bayesian models

arXiv 2209.09190 ↗First posted 19 Sep 2022stat.CO stat.ME stat.MLcited by 0

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Abstract (arXiv)

Leave-one-out cross-validation (LOO-CV) is a popular method for estimating out-of-sample predictive accuracy. However, computing LOO-CV criteria can be computationally expensive due to the need to fit the model multiple times. In the Bayesian context, importance sampling provides a possible solution but classical approaches can easily produce estimators whose asymptotic variance is infinite, making them potentially unreliable. Here we propose and analyze a novel mixture estimator to compute Bayesian LOO-CV criteria. Our method retains the simplicity and computational convenience of classical approaches, while guaranteeing finite asymptotic variance of the resulting estimators. Both theoretical and numerical results are provided to illustrate the improved robustness and efficiency. The computational benefits are particularly significant in high-dimensional problems, allowing to perform Bayesian LOO-CV for a broader range of models, and datasets with highly influential observations. The proposed methodology is easily implementable in standard probabilistic programming software and has a computational cost roughly equivalent to fitting the original model once.

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References · 10

  1. 2015Practical Bayesian model evaluation using leave-one-out cross-validation and WAICcited by 110
  2. 2013Understanding predictive information criteria for Bayesian modelscited by 51
  3. 2018A Swiss Army Infinitesimal Jackknifecited by 51
  4. 2015Pareto Smoothed Importance Samplingcited by 42
  5. 2017Using stacking to average Bayesian predictive distributionscited by 39
  6. 2019On the marginal likelihood and cross-validationcited by 36
  7. 2017On Optimal Generalizability in Parametric Learningcited by 12
  8. 2019Scalable and Accurate Variational Bayes for High-Dimensional Binary Regression Modelscited by 12
  9. 2018Scalable Importance Tempering and Bayesian Variable Selectioncited by 9
  10. 2018Unbiased estimation of log normalizing constants with applications to Bayesian cross-validationcited by 1

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