Zeroth-Order SciML: Non-intrusive Integration of Scientific Software with Deep Learning
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Abstract (arXiv)
Using deep learning (DL) to accelerate and/or improve scientific workflows can yield discoveries that are otherwise impossible. Unfortunately, DL models have yielded limited success in complex scientific domains due to large data requirements. In this work, we propose to overcome this issue by integrating the abundance of scientific knowledge sources (SKS) with the DL training process. Existing knowledge integration approaches are limited to using differentiable knowledge source to be compatible with first-order DL training paradigm. In contrast, our proposed approach treats knowledge source as a black-box in turn allowing to integrate virtually any knowledge source. To enable an end-to-end training of SKS-coupled-DL, we propose to use zeroth-order optimization (ZOO) based gradient-free training schemes, which is non-intrusive, i.e., does not require making any changes to the SKS. We evaluate the performance of our ZOO training scheme on two real-world material science applications. We show that proposed scheme is able to effectively integrate scientific knowledge with DL training and is able to outperform purely data-driven model for data-limited scientific applications. We also discuss some limitations of the proposed method and mention potentially worthwhile future directions.
Key facts. Cited by 4 papers in the map (data through 7 Oct 2026). Builds on 7 of its 11 references that are in the map. First posted on arXiv 4 Jun 2022.
Builds on
7 of 11 references.
References · 7
- 2018Junction Tree Variational Autoencoder for Molecular Graph Generationcited by 647
- 2017Grammar Variational Autoencodercited by 283
- 2019Informed Machine Learning -- A Taxonomy and Survey of Integrating Knowledge into Learning Systemscited by 203
- 2020A Primer on Zeroth-Order Optimization in Signal Processing and Machine Learningcited by 160
- 2020Combining Differentiable PDE Solvers and Graph Neural Networks for Fluid Flow Predictioncited by 137
- 2018Zeroth-Order Stochastic Variance Reduction for Nonconvex Optimizationcited by 109
- 2021DQC: a Python program package for Differentiable Quantum Chemistrycited by 7
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Citing papers per year: 2023: 1; 2024: 2; 2025: 1.
4 papers.
- 2024Revisiting Zeroth-Order Optimization for Memory-Efficient LLM Fine-Tuning: A Benchmarkcited by 113
- 2023DeepZero: Scaling up Zeroth-Order Optimization for Deep Model Trainingcited by 76
- 2024End-to-End Mesh Optimization of a Hybrid Deep Learning Black-Box PDE Solvercited by 1
- 2025Subspace-based Approximate Hessian Method for Zeroth-Order Optimizationcited by 1
- 2025Subspace-based Approximate Hessian Method for Zeroth-Order Optimization8 Jul 2025
- 2024End-to-End Mesh Optimization of a Hybrid Deep Learning Black-Box PDE Solver17 Apr 2024
- 2024Revisiting Zeroth-Order Optimization for Memory-Efficient LLM Fine-Tuning: A Benchmark18 Feb 2024
- 2023DeepZero: Scaling up Zeroth-Order Optimization for Deep Model Training3 Oct 2023