Estimating Redundancy in Clinical Text
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Abstract (arXiv)
The current mode of use of Electronic Health Record (EHR) elicits text redundancy. Clinicians often populate new documents by duplicating existing notes, then updating accordingly. Data duplication can lead to a propagation of errors, inconsistencies and misreporting of care. Therefore, quantifying information redundancy can play an essential role in evaluating innovations that operate on clinical narratives. This work is a quantitative examination of information redundancy in EHR notes. We present and evaluate two strategies to measure redundancy: an information-theoretic approach and a lexicosyntactic and semantic model. We evaluate the measures by training large Transformer-based language models using clinical text from a large openly available US-based ICU dataset and a large multi-site UK based Trust. By comparing the information-theoretic content of the trained models with open-domain language models, the language models trained using clinical text have shown ~1.5x to ~3x less efficient than open-domain corpora. Manual evaluation shows a high correlation with lexicosyntactic and semantic redundancy, with averages ~43 to ~65%.
Key facts. Cited by 10 papers in the map (data through 14 Oct 2026). Builds on 16 of its 70 references that are in the map. First posted on arXiv 25 May 2021.
Builds on
16 of 70 references.
References · 16
- 2017Attention Is All You Needcited by 60,361
- 2018BERT: Pre-training of Deep Bidirectional Transformers for Language Understandingcited by 40,399
- 2020Language Models are Few-Shot Learnerscited by 32,419
- 2019Exploring the Limits of Transfer Learning with a Unified Text-to-Text Transformercited by 14,599
- 2019Sentence-BERT: Sentence Embeddings using Siamese BERT-Networkscited by 9,170
- 2019BART: Denoising Sequence-to-Sequence Pre-training for Natural Language Generation, Translation, and Comprehensioncited by 5,893
- 2019BERTScore: Evaluating Text Generation with BERTcited by 5,512
- 2016Pointer Sentinel Mixture Modelscited by 3,096
- 2019XLNet: Generalized Autoregressive Pretraining for Language Understandingcited by 2,811
- 2017Get To The Point: Summarization with Pointer-Generator Networkscited by 1,292
- 2019PEGASUS: Pre-training with Extracted Gap-sentences for Abstractive Summarizationcited by 1,102
- 2020Multi-domain Clinical Natural Language Processing with MedCAT: the Medical Concept Annotation Toolkitcited by 66
4 more
- 2018MedSTS: A Resource for Clinical Semantic Textual Similaritycited by 39
- 2020Deep Representation Learning of Electronic Health Records to Unlock Patient Stratification at Scalecited by 39
- 2019Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilationcited by 30
- 2019MedCAT -- Medical Concept Annotation Toolcited by 10
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Citing papers per year: 2022: 3; 2023: 4; 2024: 2; 2025: 1.
10 papers.
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- 2022Discharge Summary Hospital Course Summarisation of In Patient Electronic Health Record Text with Clinical Concept Guided Deep Pre-Trained Transformer Modelscited by 18
- 2022Foresight -- Generative Pretrained Transformer (GPT) for Modelling of Patient Timelines using EHRscited by 11
- 2025Universal Abstraction: Harnessing Frontier Models to Structure Real-World Data at Scalecited by 6
- 2024Large Language Models for Medical Forecasting -- Foresight 2cited by 5
- 2023Clinical Text Deduplication Practices for Efficient Pretraining and Improved Clinical Taskscited by 3
- 2023Content Reduction, Surprisal and Information Density Estimation for Long Documentscited by 1
- 2024Bespoke Large Language Models for Digital Triage Assistance in Mental Health Carecited by 1
- 2023Application of Transformers based methods in Electronic Medical Records: A Systematic Literature Reviewcited by 0
- 2025Universal Abstraction: Harnessing Frontier Models to Structure Real-World Data at Scale2 Feb 2025
- 2024Large Language Models for Medical Forecasting -- Foresight 214 Dec 2024
- 2024Bespoke Large Language Models for Digital Triage Assistance in Mental Health Care28 Mar 2024
- 2023Clinical Text Deduplication Practices for Efficient Pretraining and Improved Clinical Tasks29 Sep 2023
- 2023Content Reduction, Surprisal and Information Density Estimation for Long Documents12 Sep 2023
- 2023A Study of Generative Large Language Model for Medical Research and Healthcare22 May 2023
- 2023Application of Transformers based methods in Electronic Medical Records: A Systematic Literature Review5 Apr 2023
- 2022Foresight -- Generative Pretrained Transformer (GPT) for Modelling of Patient Timelines using EHRs13 Dec 2022
- 2022Discharge Summary Hospital Course Summarisation of In Patient Electronic Health Record Text with Clinical Concept Guided Deep Pre-Trained Transformer Models14 Nov 2022
- 2022Automated Clinical Coding: What, Why, and Where We Are?21 Mar 2022