mlsanityData to 14 Oct 2026

Autonomous Discovery of Unknown Reaction Pathways from Data by Chemical Reaction Neural Network

arXiv 2002.09062 ↗First posted 20 Feb 2020q-bio.MN cs.LG physics.chem-phcited by 27

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Abstract (arXiv)

Chemical reactions occur in energy, environmental, biological, and many other natural systems, and the inference of the reaction networks is essential to understand and design the chemical processes in engineering and life sciences. Yet, revealing the reaction pathways for complex systems and processes is still challenging due to the lack of knowledge of the involved species and reactions. Here, we present a neural network approach that autonomously discovers reaction pathways from the time-resolved species concentration data. The proposed Chemical Reaction Neural Network (CRNN), by design, satisfies the fundamental physics laws, including the Law of Mass Action and the Arrhenius Law. Consequently, the CRNN is physically interpretable such that the reaction pathways can be interpreted, and the kinetic parameters can be quantified simultaneously from the weights of the neural network. The inference of the chemical pathways is accomplished by training the CRNN with species concentration data via stochastic gradient descent. We demonstrate the successful implementations and the robustness of the approach in elucidating the chemical reaction pathways of several chemical engineering and biochemical systems. The autonomous inference by the CRNN approach precludes the need for expert knowledge in proposing candidate networks and addresses the curse of dimensionality in complex systems. The physical interpretability also makes the CRNN capable of not only fitting the data for a given system but also developing knowledge of unknown pathways that could be generalized to similar chemical systems.

Key facts. Cited by 27 papers in the map (data through 14 Oct 2026). First posted on arXiv 20 Feb 2020.

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Cited by year (2026 to 14 Oct)

Citing papers per year: 2021: 3; 2022: 2; 2023: 3; 2024: 5; 2025: 8; 2026: 6.

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  1. 2021Stiff Neural Ordinary Differential Equationscited by 78
  2. 2024KAN-ODEs: Kolmogorov-Arnold Network Ordinary Differential Equations for Learning Dynamical Systems and Hidden Physicscited by 59
  3. 2022Improving aircraft performance using machine learning: a reviewcited by 19
  4. 2024Training Stiff Neural Ordinary Differential Equations with Implicit Single-Step Methodscited by 11
  5. 2021Autonomous Kinetic Modeling of Biomass Pyrolysis using Chemical Reaction Neural Networkscited by 6
  6. 2023Bayesian polynomial neural networks and polynomial neural ordinary differential equationscited by 6
  7. 2024Training Stiff Neural Ordinary Differential Equations with Explicit Exponential Integration Methodscited by 5
  8. 2025ChemKANs for Combustion Chemistry Modeling and Accelerationcited by 4
  9. 2025SPIN-ODE: Stiff Physics-Informed Neural ODE for Chemical Reaction Rate Estimationcited by 3
  10. 2022Structural Inference of Networked Dynamical Systems with Universal Differential Equationscited by 2
  11. 2024Chemical Reaction Neural Networks for Fitting Accelerating Rate Calorimetry Datacited by 2
  12. 2023Maximum-likelihood Estimators in Physics-Informed Neural Networks for High-dimensional Inverse Problemscited by 1
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  2. 2025Using (Not-so) Large Language Models to Generate Simulation Models in a Formal DSL: A Study on Reaction Networkscited by 1
  3. 2025Kolmogorov-Arnold Chemical Reaction Neural Networks for learning pressure-dependent kinetic rate lawscited by 1
  4. 2021Data-driven discovery of multiscale chemical reactions governed by the law of mass actioncited by 0
  5. 2023Constructing interpretable principal curve using Neural ODEscited by 0
  6. 2025Modelling Chemical Reaction Networks using Neural Ordinary Differential Equationscited by 0
  7. 2025Learning surrogate equations for the analysis of an agent-based cancer modelcited by 0
  8. 2025A novel biomass fluidized bed gasification model coupled with machine learning and CFD simulationcited by 0
  9. 2025Learning continuous state of charge dependent thermal decomposition kinetics for Li-ion cathodes using Kolmogorov-Arnold Chemical Reaction Neural Networks (KA-CRNNs)cited by 0
  10. 2026Task Aware Modulation Using Representation Learning for Upsaling of Terrestrial Carbon Fluxescited by 0
  11. 2026An Invariant Compiler for Neural ODEs in AI-Accelerated Scientific Simulationcited by 0
  12. 2026Generative Modeling of Discrete Latent Structures via Dynamic Policy Gradientscited by 0
  13. 2026Entropy-Constrained Machine Learning with Residual Data Augmentation for Modeling Chemical Kineticscited by 0
  14. 2026NEMSim: Learning Control-Conditioned Multi-Event Physical Dynamics via Executable Event-Mechanism Priorscited by 0
  15. 2026Atoms to Processes: The Role of Artificial Intelligence and Machine Learning in Chemical Engineeringcited by 0