Machine Learning Techniques for Biomedical Image Segmentation: An Overview of Technical Aspects and Introduction to State-of-Art Applications
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Abstract (arXiv)
In recent years, significant progress has been made in developing more accurate and efficient machine learning algorithms for segmentation of medical and natural images. In this review article, we highlight the imperative role of machine learning algorithms in enabling efficient and accurate segmentation in the field of medical imaging. We specifically focus on several key studies pertaining to the application of machine learning methods to biomedical image segmentation. We review classical machine learning algorithms such as Markov random fields, k-means clustering, random forest, etc. Although such classical learning models are often less accurate compared to the deep learning techniques, they are often more sample efficient and have a less complex structure. We also review different deep learning architectures, such as the artificial neural networks (ANNs), the convolutional neural networks (CNNs), and the recurrent neural networks (RNNs), and present the segmentation results attained by those learning models that were published in the past three years. We highlight the successes and limitations of each machine learning paradigm. In addition, we discuss several challenges related to the training of different machine learning models, and we present some heuristics to address those challenges.
Key facts. Cited by 17 papers in the map (data through 14 Oct 2026). First posted on arXiv 6 Nov 2019.
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Citing papers per year: 2021: 4; 2022: 1; 2023: 2; 2024: 7; 2025: 2; 2026: 1.
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- 2024VM-UNet: Vision Mamba UNet for Medical Image Segmentationcited by 287
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- 2025PromptForSegCXR: Prompt-Driven Multi-Organ and Multi-Disease Segmentation in Chest X-rays using a Multi-stage Fusion Mechanismcited by 0
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- 2026UI-VISA: U-Net Initialized Vascular Image Segmentation Architecture1 Sep 2026
- 2025The SAM2-to-SAM3 Gap in the Segment Anything Model Family: Why Prompt-Based Expertise Fails in Concept-Driven Image Segmentation4 Dec 2025
- 2025PromptForSegCXR: Prompt-Driven Multi-Organ and Multi-Disease Segmentation in Chest X-rays using a Multi-stage Fusion Mechanism1 Jul 2025
- 2024Private, Efficient and Scalable Kernel Learning for Medical Image Analysis21 Oct 2024
- 2024Two-Phase Segmentation Approach for Accurate Left Ventricle Segmentation in Cardiac MRI using Machine Learning29 Jul 2024
- 2024AI-based Automatic Segmentation of Prostate on Multi-modality Images: A Review9 Jul 2024
- 2024Open Challenges and Opportunities in Federated Foundation Models Towards Biomedical Healthcare10 May 2024
- 2024A Complete System for Automated 3D Semantic-Geometric Mapping of Corrosion in Industrial Environments21 Apr 2024
- 2024NeuroMorphix: A Novel Brain MRI Asymmetry-specific Feature Construction Approach For Seizure Recurrence Prediction16 Apr 2024
- 2024VM-UNet: Vision Mamba UNet for Medical Image Segmentation4 Feb 2024
- 2023SoK: Memorisation in machine learning6 Nov 2023
- 2023UCM-Net: A Lightweight and Efficient Solution for Skin Lesion Segmentation using MLP and CNN14 Oct 2023
5 more
- 2022Deep learning automates bidimensional and volumetric tumor burden measurement from MRI in pre- and post-operative glioblastoma patients3 Sep 2022
- 2021Latent Space Explanation by Intervention9 Dec 2021
- 2021Automatic Segmentation of the Optic Nerve Head Region in Optical Coherence Tomography: A Methodological Review6 Sep 2021
- 2021Stroke Lesion Segmentation with Visual Cortex Anatomy Alike Neural Nets13 May 2021
- 2021Intentional Deep Overfit Learning (IDOL): A Novel Deep Learning Strategy for Adaptive Radiation Therapy23 Apr 2021
- 2024VM-UNet: Vision Mamba UNet for Medical Image Segmentationcited by 287
- 2021Latent Space Explanation by Interventioncited by 13
- 2024Open Challenges and Opportunities in Federated Foundation Models Towards Biomedical Healthcarecited by 12
- 2022Deep learning automates bidimensional and volumetric tumor burden measurement from MRI in pre- and post-operative glioblastoma patientscited by 3
- 2023UCM-Net: A Lightweight and Efficient Solution for Skin Lesion Segmentation using MLP and CNNcited by 2
- 2025The SAM2-to-SAM3 Gap in the Segment Anything Model Family: Why Prompt-Based Expertise Fails in Concept-Driven Image Segmentationcited by 2
- 2021Automatic Segmentation of the Optic Nerve Head Region in Optical Coherence Tomography: A Methodological Reviewcited by 1
- 2023SoK: Memorisation in machine learningcited by 1
- 2021Intentional Deep Overfit Learning (IDOL): A Novel Deep Learning Strategy for Adaptive Radiation Therapycited by 0
- 2021Stroke Lesion Segmentation with Visual Cortex Anatomy Alike Neural Netscited by 0
- 2024NeuroMorphix: A Novel Brain MRI Asymmetry-specific Feature Construction Approach For Seizure Recurrence Predictioncited by 0
- 2024A Complete System for Automated 3D Semantic-Geometric Mapping of Corrosion in Industrial Environmentscited by 0
- 2024AI-based Automatic Segmentation of Prostate on Multi-modality Images: A Reviewcited by 0
12 most cited of 16 All 16 (JSON)
- 2026UI-VISA: U-Net Initialized Vascular Image Segmentation Architecture1 Sep 2026
- 2025The SAM2-to-SAM3 Gap in the Segment Anything Model Family: Why Prompt-Based Expertise Fails in Concept-Driven Image Segmentation4 Dec 2025
- 2025PromptForSegCXR: Prompt-Driven Multi-Organ and Multi-Disease Segmentation in Chest X-rays using a Multi-stage Fusion Mechanism1 Jul 2025
- 2024Private, Efficient and Scalable Kernel Learning for Medical Image Analysis21 Oct 2024
- 2024Two-Phase Segmentation Approach for Accurate Left Ventricle Segmentation in Cardiac MRI using Machine Learning29 Jul 2024
- 2024AI-based Automatic Segmentation of Prostate on Multi-modality Images: A Review9 Jul 2024
- 2024Open Challenges and Opportunities in Federated Foundation Models Towards Biomedical Healthcare10 May 2024
- 2024A Complete System for Automated 3D Semantic-Geometric Mapping of Corrosion in Industrial Environments21 Apr 2024
- 2024NeuroMorphix: A Novel Brain MRI Asymmetry-specific Feature Construction Approach For Seizure Recurrence Prediction16 Apr 2024
- 2023SoK: Memorisation in machine learning6 Nov 2023
- 2023UCM-Net: A Lightweight and Efficient Solution for Skin Lesion Segmentation using MLP and CNN14 Oct 2023
- 2022Deep learning automates bidimensional and volumetric tumor burden measurement from MRI in pre- and post-operative glioblastoma patients3 Sep 2022
12 newest of 16 All 16 (JSON)