mlsanityData to 14 Oct 2026

CIDER-FM: Foundation Models for Causal Inference from Diverse Experimental Regimes

arXiv 2609.39523 ↗First posted 30 Sep 2026cs.LGcited by 0

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Abstract (arXiv)

Causal foundation models (CFMs) amortise causal inference over priors of synthetic structural causal models (SCMs), predicting the effect of an experiment on a specific variable. However, observational data alone may leave multiple causal models compatible with available evidence, while experimental data with interventions on exactly the variable of interest might be unavailable. This work studies CFMs as a method to combine finite observational and surrogate-interventional datasets in order to predict a target conditional interventional distribution (CID) more accurately than with observational data alone. We first formalise the conceptual benefits of surrogate experiments. Building on this analysis, we introduce textscFoundation Models for Causal Inference from Diverse Experimental Regimes (CIDER-FM), a causal foundation model that uses an intervention-aware representation and hierarchical three-axis attention to exchange information across variables, samples, and experimental regimes. We evaluate CIDER-FM against a wide range of baselines across diverse synthetic graph and mechanism families, as well as on both simulated and real-world data from Causal Chambers. Our results demonstrate strong CID prediction performance and show that incorporating experimental context can improve predictions over observational data alone.

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References · 18

  1. 2020GLU Variants Improve Transformercited by 1,804
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  11. 2025Estimating Interventional Distributions with Uncertain Causal Graphs through Meta-Learningcited by 13
  12. 2023Bivariate Causal Discovery using Bayesian Model Selectioncited by 12
6 more
  1. 2026Use What You Know: Causal Foundation Models with Partial Graphscited by 7
  2. 2024Effective Bayesian Causal Inference via Structural Marginalisation and Autoregressive Orderscited by 6
  3. 2025Position: Causal Machine Learning Requires Rigorous Synthetic Experiments for Broader Adoptioncited by 6
  4. 2025Sanity Checking Causal Representation Learning on a Simple Real-World Systemcited by 5
  5. 2023On Identifiability of Conditional Causal Effectscited by 4
  6. 2026PerturbPFN: Probing the Limits of Synthetic Priors in Drug Perturbation Modellingcited by 2

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