Accelerated surrogate dynamics for dynamical, stochastic system evolution
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Abstract (arXiv)
Dynamic simulations are an entrenched way of gaining insight into the evolution of system dynamics. Their computational cost however is often prohibitively high, especially in cases of stochastic frameworks. Machine learning algorithms are especially suited as simulation surrogates. Nevertheless, they face some very distinct limitations. Firstly, the sheer dimensionality of these systems, however, precludes the use of traditional time series models who struggle with high dimensional feature spaces. Additionally, traditional time series focus exclusively on either long or short range effects, causing local or global drift given enough time. In this paper, we propose a framework that addresses those limitations. Our framework combines a Variational Autoencoder, with a convolutional or graph basis that reduces the dimensionality of the system. This latent vector is propagated in time using a Temporal Fusion Transformer model, which includes both long range and short range effect encoding, as well as static covariate support. We test our framework on three distinct cases, to prove its robustness and in all three we have achieved practically identical to the simulation results at a fraction of the time. Further, our framework is flexible enough to be adapted to any new system and provides an inbuilt uncertainty quantification for targeted experiment design.
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References · 11
- 2015Deep Residual Learning for Image Recognitioncited by 52,096
- 2016Layer Normalizationcited by 5,669
- 2019Temporal Fusion Transformers for Interpretable Multi-horizon Time Series Forecastingcited by 761
- 2016Language Modeling with Gated Convolutional Networkscited by 702
- 2020Masked Label Prediction: Unified Message Passing Model for Semi-Supervised Classificationcited by 506
- 2021Machine learning accelerated computational fluid dynamicscited by 471
- 2019Machine learning for molecular simulationcited by 110
- 2018Machine Learning of coarse-grained Molecular Dynamics Force Fieldscited by 69
- 2025How simple can you go? An off-the-shelf transformer approach to molecular dynamicscited by 10
- 2024AUGUR, A flexible and efficient optimization algorithm for identification of optimal adsorption sitescited by 2
- 2023Generating High-Precision Force Fields for Molecular Dynamics Simulations to Study Chemical Reaction Mechanisms using Molecular Configuration Transformercited by 1
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